Strain Fitness in Pseudomonas simiae WCS417 around PS417_11080

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
2,373,676	+		PS417_11070	0.87	-1.5
2,373,677	-		PS417_11070	0.88	-2.3
2,373,677	-				+0.4
2,373,781	+				+0.1
2,373,807	-				-0.2
2,373,807	-				-1.9
2,373,812	+				+0.1
2,373,814	+				-2.4
2,374,055	+		PS417_11075	0.31	-1.6
2,374,414	-		PS417_11075	0.77	+1.2
2,374,415	+		PS417_11075	0.77	+2.4
2,374,415	+		PS417_11075	0.77	+1.1
2,374,415	+		PS417_11075	0.77	+1.9
2,374,416	-		PS417_11075	0.78	-1.9
2,374,522	+				-0.4
2,374,590	+				+1.1
2,374,590	+				+0.5
2,374,591	-				-2.3
2,374,729	+		PS417_11080	0.14	+0.8
2,375,737	+				-2.8
2,375,737	+				-0.1
2,375,811	+				+0.6
2,376,098	+		PS417_11085	0.16	-1.4
2,376,133	-		PS417_11085	0.18	+0.2
2,376,374	+		PS417_11085	0.30	-1.2
2,376,506	+		PS417_11085	0.37	-0.4
2,376,507	-		PS417_11085	0.37	+1.1