Strain Fitness in Pseudomonas simiae WCS417 around PS417_11005

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
2,357,314	-		PS417_11000	0.59	-0.2
2,357,327	+		PS417_11000	0.60	+3.4
2,357,701	+				+1.8
2,357,702	-		PS417_11000	0.82	-0.4
2,357,702	-		PS417_11000	0.82	-1.0
2,358,232	-				+0.4
2,358,232	-				+0.1
2,358,395	-		PS417_11005	0.14	-0.9
2,358,526	+		PS417_11005	0.24	+1.1
2,358,584	-		PS417_11005	0.28	-0.2
2,358,586	+		PS417_11005	0.28	+1.1
2,358,586	+		PS417_11005	0.28	+0.2
2,358,654	+		PS417_11005	0.33	-1.6
2,358,790	+		PS417_11005	0.44	-0.7
2,358,953	-		PS417_11005	0.56	-1.9
2,358,977	-		PS417_11005	0.58	+1.0
2,359,060	+		PS417_11005	0.64	+0.6
2,359,062	+		PS417_11005	0.64	-0.3
2,359,343	-		PS417_11005	0.86	-1.7
2,359,378	+		PS417_11005	0.88	+0.4
2,359,379	-		PS417_11005	0.88	-1.7
2,359,379	-		PS417_11005	0.88	-0.1
2,359,379	-		PS417_11005	0.88	-0.8
2,359,527	+				-1.4
2,359,527	+				-1.6
2,359,527	+				+2.0
2,359,528	-				+0.9
2,359,531	+				-0.3
2,359,571	+				+0.6
2,359,572	-				+0.4
2,359,572	-				+0.4
2,359,792	-		PS417_11010	0.25	+1.4
2,359,963	+		PS417_11010	0.42	-1.7
2,359,963	+		PS417_11010	0.42	+2.9
2,360,149	+		PS417_11010	0.61	+0.2
2,360,155	+		PS417_11010	0.61	+3.7
2,360,156	-		PS417_11010	0.61	+0.1
2,360,302	-		PS417_11010	0.76	-1.8
2,360,330	-		PS417_11010	0.79	-1.0
2,360,372	+		PS417_11010	0.83	-2.0
2,360,373	-		PS417_11010	0.83	+0.3
2,360,373	-		PS417_11010	0.83	-0.1