Strain Fitness in Pseudomonas simiae WCS417 around PS417_10370

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
2,217,766	-				+0.0
2,217,798	-				+0.5
2,217,919	+		PS417_10365	0.11	-0.3
2,217,920	-		PS417_10365	0.11	-0.7
2,217,996	+		PS417_10365	0.20	+0.1
2,217,997	-		PS417_10365	0.20	+1.5
2,217,997	-		PS417_10365	0.20	-0.3
2,218,131	+		PS417_10365	0.37	-1.4
2,218,132	-				+0.1
2,218,239	+				+1.5
2,218,401	+		PS417_10365	0.70	-1.8
2,218,401	+		PS417_10365	0.70	+0.3
2,218,402	-		PS417_10365	0.70	+0.1
2,218,402	-		PS417_10365	0.70	-1.0
2,218,566	+				+0.3
2,218,711	+				+0.2
2,218,814	-		PS417_10370	0.15	+1.6
2,219,319	-		PS417_10370	0.52	-0.9
2,219,339	-		PS417_10370	0.54	+1.3
2,219,726	-		PS417_10370	0.82	+0.8
2,219,861	-				-0.2
2,220,003	+				-1.4
2,220,003	+				-0.2
2,220,003	+				+0.7
2,220,180	-		PS417_10375	0.30	-0.7
2,220,679	+				+0.3
2,220,679	+				-1.0
2,220,680	-				+0.1
2,220,713	-				+0.1
2,220,746	+				+1.9
2,220,778	-				+0.1