Strain Fitness in Pseudomonas simiae WCS417 around PS417_10030

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
2,155,375	-				-0.8
2,155,525	+		PS417_10025	0.26	-0.1
2,155,526	-		PS417_10025	0.26	+0.5
2,155,950	-				-0.5
2,156,091	-		PS417_10030	0.15	-0.4
2,156,250	+		PS417_10030	0.38	+0.5
2,156,312	-		PS417_10030	0.47	+0.1
2,156,328	+		PS417_10030	0.50	-2.0
2,156,328	+		PS417_10030	0.50	-1.8
2,156,328	+		PS417_10030	0.50	-2.1
2,156,329	-		PS417_10030	0.50	-1.3
2,156,413	-		PS417_10030	0.62	-0.1
2,156,449	+		PS417_10030	0.68	+0.5
2,156,450	-		PS417_10030	0.68	-0.3
2,156,457	-		PS417_10030	0.69	+0.8
2,156,457	-		PS417_10030	0.69	-0.7
2,156,720	-				-0.0
2,156,893	+				-0.6
2,156,893	+				+1.4
2,156,912	+				-0.8
2,156,913	-				-0.5
2,156,916	+				-0.1
2,156,981	-		PS417_10035	0.18	-0.3
2,156,990	+		PS417_10035	0.19	-0.1
2,156,991	-		PS417_10035	0.20	+0.7
2,156,991	-		PS417_10035	0.20	-1.8
2,157,069	+				+0.9
2,157,076	-		PS417_10035	0.31	+0.2
2,157,096	-		PS417_10035	0.33	-0.2
2,157,096	-		PS417_10035	0.33	+0.4
2,157,161	-				+1.5
2,157,192	+		PS417_10035	0.46	-0.2
2,157,193	-		PS417_10035	0.46	-0.8
2,157,251	-		PS417_10035	0.54	-1.3
2,157,251	-		PS417_10035	0.54	-1.9
2,157,277	+		PS417_10035	0.57	+0.8
2,157,277	+		PS417_10035	0.57	-1.8
2,157,277	+		PS417_10035	0.57	-1.6
2,157,278	-		PS417_10035	0.57	-0.0
2,157,370	+		PS417_10035	0.69	+0.1
2,157,577	+				+0.1
2,157,603	+				+0.3
2,157,603	+				-0.8
2,157,603	+				-1.0
2,157,604	-				+0.0
2,157,604	-				+0.2
2,157,617	+				-0.1
2,157,617	+				-0.1
2,157,617	+				+0.3
2,157,618	-				-0.6
2,157,656	-				+0.8