Strain Fitness in Pseudomonas simiae WCS417 around PS417_09795

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
2,122,697	+				+0.7
2,123,000	+		PS417_09790	0.40	-1.6
2,123,004	+		PS417_09790	0.40	+1.1
2,123,004	+				-0.8
2,123,005	-		PS417_09790	0.40	+0.0
2,123,005	-		PS417_09790	0.40	+1.5
2,123,005	-		PS417_09790	0.40	+0.1
2,123,005	-		PS417_09790	0.40	+1.0
2,123,005	-		PS417_09790	0.40	-1.3
2,123,005	-		PS417_09790	0.40	+0.8
2,123,028	-		PS417_09790	0.43	+0.4
2,123,254	+		PS417_09790	0.72	+1.0
2,123,355	-		PS417_09790	0.85	+0.6
2,123,360	+		PS417_09790	0.86	-1.5
2,123,360	+		PS417_09790	0.86	+0.7
2,123,521	+				+1.8
2,123,612	+				-1.2
2,123,613	-				-0.3
2,123,627	-				-1.2
2,123,643	-				-0.7
2,123,680	-				+1.2
2,123,686	+				-0.8
2,123,687	-				+0.1
2,123,707	-		PS417_09795	0.10	+1.2
2,123,726	+		PS417_09795	0.11	-0.8
2,123,726	+		PS417_09795	0.11	-0.1
2,123,748	-				-0.3
2,123,751	+		PS417_09795	0.12	-0.2
2,123,854	+		PS417_09795	0.17	-0.6
2,123,854	+		PS417_09795	0.17	+0.2
2,123,854	+		PS417_09795	0.17	+0.1
2,123,886	-		PS417_09795	0.19	+0.0
2,124,021	+		PS417_09795	0.25	-0.9
2,124,022	-		PS417_09795	0.25	-1.1
2,124,159	-		PS417_09795	0.31	-0.0
2,124,238	-		PS417_09795	0.35	-0.9
2,124,238	-		PS417_09795	0.35	-1.4
2,124,369	+		PS417_09795	0.41	-0.9
2,124,369	+		PS417_09795	0.41	-0.5
2,124,369	+		PS417_09795	0.41	-0.7
2,124,370	-		PS417_09795	0.41	-0.1
2,124,370	-		PS417_09795	0.41	-0.2
2,124,370	-		PS417_09795	0.41	-0.2
2,124,372	-		PS417_09795	0.41	-0.1
2,124,469	+		PS417_09795	0.46	-2.1
2,124,470	-		PS417_09795	0.46	-0.8
2,124,489	+		PS417_09795	0.47	+0.4
2,124,489	+		PS417_09795	0.47	+0.0
2,124,489	+		PS417_09795	0.47	+0.1
2,124,489	+		PS417_09795	0.47	+0.5
2,124,489	+		PS417_09795	0.47	+2.2
2,124,490	-		PS417_09795	0.47	+0.3
2,124,490	-		PS417_09795	0.47	-0.3
2,124,638	+		PS417_09795	0.54	+0.3
2,124,639	-		PS417_09795	0.54	-0.2
2,124,670	+		PS417_09795	0.55	+0.2
2,124,670	+		PS417_09795	0.55	-1.0
2,124,670	+		PS417_09795	0.55	-0.7
2,124,749	+		PS417_09795	0.59	-0.1
2,124,749	+		PS417_09795	0.59	-0.7
2,124,765	-		PS417_09795	0.60	+0.5
2,124,770	+		PS417_09795	0.60	+0.9
2,125,196	+		PS417_09795	0.80	-0.5
2,125,197	-		PS417_09795	0.80	-1.8
2,125,197	-		PS417_09795	0.80	-1.4
2,125,221	+		PS417_09795	0.81	-0.6
2,125,704	-				-0.5
2,125,737	-				-0.9
2,126,055	+		PS417_09800	0.33	+0.1
2,126,123	+		PS417_09800	0.39	-2.0
2,126,275	-		PS417_09800	0.51	+1.5
2,126,330	+		PS417_09800	0.56	-0.5