Strain Fitness in Pseudomonas simiae WCS417 around PS417_09755

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
2,113,884	+		PS417_09750	0.83	-0.0
2,113,885	-		PS417_09750	0.83	-0.4
2,113,942	-		PS417_09750	0.86	-0.1
2,114,011	-		PS417_09750	0.89	-0.1
2,114,049	-				-0.1
2,114,052	+				+0.7
2,114,052	+				+0.2
2,114,052	+				+0.4
2,114,052	+				-1.5
2,114,052	+				-0.1
2,114,053	-				-0.1
2,114,053	-				-0.7
2,114,100	+				-0.3
2,114,101	-				-2.0
2,114,199	+				+2.1
2,114,200	-				-0.7
2,114,232	+				-0.0
2,114,232	+				-1.1
2,114,371	+				+1.8
2,114,375	+				-0.9
2,114,522	+				+0.1
2,114,522	+				-0.1
2,114,523	-				+0.5
2,114,523	-				-0.1
2,114,523	-				-0.5
2,114,523	-				-0.2
2,114,618	-				+0.3
2,114,757	-				+0.9
2,114,773	+				+0.6
2,114,807	+				+0.5
2,114,840	+		PS417_09755	0.11	+0.2
2,114,840	+		PS417_09755	0.11	+0.2
2,114,841	-		PS417_09755	0.11	-0.8
2,114,897	+		PS417_09755	0.21	+1.8
2,114,898	-		PS417_09755	0.22	+0.1
2,115,130	+		PS417_09755	0.65	+0.6
2,115,182	+		PS417_09755	0.75	+1.5
2,115,251	-		PS417_09755	0.88	-0.8
2,115,251	-		PS417_09755	0.88	+0.5
2,115,253	+		PS417_09755	0.88	+0.8
2,115,254	-		PS417_09755	0.88	+0.2
2,115,258	-				-0.5
2,115,258	-		PS417_09755	0.89	+0.8
2,115,370	+				-0.7
2,115,411	+				+0.1
2,115,411	+				+0.3
2,115,426	-				+1.5
2,115,472	-				+0.1
2,115,519	+				+0.3
2,115,519	+				-0.5
2,115,802	+				+0.0
2,115,946	+				+0.2
2,115,946	+				+0.3
2,115,995	+				-2.3
2,115,995	+				-0.4
2,115,998	-				+0.5
2,116,053	-				-0.4