Strain Fitness in Pseudomonas simiae WCS417 around PS417_09570

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
2,072,216	+		PS417_09565	0.63	-0.8
2,072,216	+		PS417_09565	0.63	+2.4
2,072,333	+		PS417_09565	0.68	+0.6
2,072,615	+		PS417_09565	0.80	-0.0
2,072,717	+		PS417_09565	0.85	+0.8
2,072,718	-		PS417_09565	0.85	+0.2
2,072,718	-		PS417_09565	0.85	+0.4
2,072,730	-				-0.8
2,072,730	-		PS417_09565	0.85	-0.2
2,072,858	+				-0.2
2,072,859	-				-1.1
2,072,859	-				+0.5
2,072,978	+				-0.3
2,072,979	-				+0.2
2,072,979	-				-0.6
2,072,979	-				-1.7
2,073,291	-		PS417_09570	0.25	-0.1
2,073,294	+		PS417_09570	0.25	+0.1
2,073,294	+				+1.5
2,073,381	-		PS417_09570	0.40	+3.5
2,073,434	+		PS417_09570	0.50	-0.1
2,073,501	+		PS417_09570	0.61	+0.3
2,073,502	-		PS417_09570	0.61	-1.9
2,073,723	+				-0.5
2,073,724	-				+1.0
2,073,724	-				+0.2
2,073,741	+				-0.6
2,073,741	+				-1.5
2,073,741	+				-0.2
2,073,742	-				+0.2
2,073,966	+		PS417_09575	0.36	+0.0
2,074,024	-		PS417_09575	0.45	-0.9
2,074,024	-		PS417_09575	0.45	-2.8
2,074,334	-				+0.1
2,074,519	+				-0.6
2,074,603	+		PS417_09580	0.12	-1.3