Strain Fitness in Pseudomonas simiae WCS417 around PS417_09170

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
1,992,313	-		PS417_09165	0.41	+0.5
1,992,396	+		PS417_09165	0.46	-0.1
1,992,396	+		PS417_09165	0.46	-1.3
1,992,397	-		PS417_09165	0.47	+0.2
1,992,397	-		PS417_09165	0.47	+1.1
1,992,474	+		PS417_09165	0.51	+1.5
1,992,475	-		PS417_09165	0.51	-1.4
1,992,478	-		PS417_09165	0.52	-1.4
1,992,486	-				-1.3
1,992,486	-		PS417_09165	0.52	-1.3
1,992,486	-		PS417_09165	0.52	-1.8
1,992,641	+		PS417_09165	0.62	-0.4
1,992,641	+		PS417_09165	0.62	+0.3
1,992,642	-		PS417_09165	0.62	-0.7
1,992,843	+		PS417_09165	0.75	-0.2
1,992,843	+		PS417_09165	0.75	-1.7
1,992,843	+		PS417_09165	0.75	-1.4
1,992,843	+		PS417_09165	0.75	-1.1
1,992,844	-		PS417_09165	0.75	+0.9
1,993,098	+				+0.2
1,993,656	+		PS417_09170	0.67	+0.1
1,993,656	+		PS417_09170	0.67	+0.3
1,993,656	+		PS417_09170	0.67	-0.5
1,993,656	+		PS417_09170	0.67	-2.5
1,993,657	-		PS417_09170	0.67	-1.8
1,993,657	-				-0.5
1,993,657	-		PS417_09170	0.67	-0.0
1,993,695	-		PS417_09170	0.73	-0.5
1,993,815	-				+0.2
1,993,866	+				-1.3
1,993,866	+				-0.0
1,993,866	+				+0.9
1,993,867	-				-0.2
1,993,867	-				-0.8
1,993,867	-				+0.4
1,993,897	-				+0.9
1,994,539	+		PS417_09175	0.62	-0.9
1,994,819	+				-0.6
1,994,825	+				+0.0