Strain Fitness in Pseudomonas simiae WCS417 around PS417_09050

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
1,969,327	-		PS417_09045	0.32	+0.1
1,969,454	-		PS417_09045	0.45	-0.2
1,969,454	-		PS417_09045	0.45	+2.5
1,969,647	-		PS417_09045	0.63	-0.8
1,969,777	+		PS417_09045	0.76	+0.5
1,970,053	-				+0.3
1,970,053	-				-0.0
1,970,425	+		PS417_09050	0.52	+0.1
1,970,425	+		PS417_09050	0.52	-0.3
1,970,425	+				-0.1
1,970,425	+		PS417_09050	0.52	+0.5
1,970,425	+		PS417_09050	0.52	+0.3
1,970,425	+		PS417_09050	0.52	+1.7
1,970,425	+		PS417_09050	0.52	-0.1
1,970,426	-		PS417_09050	0.53	-0.8
1,970,426	-		PS417_09050	0.53	+0.6
1,970,426	-		PS417_09050	0.53	-1.4
1,970,426	-		PS417_09050	0.53	-0.6
1,970,426	-		PS417_09050	0.53	+1.1
1,970,426	-		PS417_09050	0.53	+3.2
1,970,426	-		PS417_09050	0.53	-0.6
1,970,426	-		PS417_09050	0.53	+0.9
1,970,426	-		PS417_09050	0.53	+1.1
1,970,427	+		PS417_09050	0.53	-0.2
1,970,427	+		PS417_09050	0.53	+1.0
1,970,428	-		PS417_09050	0.53	-1.3
1,970,428	-		PS417_09050	0.53	+0.8
1,970,428	-		PS417_09050	0.53	+0.9
1,970,428	-		PS417_09050	0.53	-0.1
1,970,428	-				-1.1
1,970,914	-				+0.3
1,970,914	-				+0.3
1,970,965	+				-1.5
1,970,969	+				+0.9
1,970,969	+				-0.3
1,971,006	+				+0.5