Strain Fitness in Pseudomonas simiae WCS417 around PS417_08845

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
1,922,902	+		PS417_08840	0.44	-0.1
1,922,975	-		PS417_08840	0.50	-0.6
1,923,091	+		PS417_08840	0.59	-1.1
1,923,092	-		PS417_08840	0.59	-0.3
1,923,148	+		PS417_08840	0.63	-1.5
1,923,149	-		PS417_08840	0.63	+0.2
1,923,263	-		PS417_08840	0.72	-0.2
1,923,266	-		PS417_08840	0.72	+2.1
1,923,280	+		PS417_08840	0.73	+0.4
1,923,281	-		PS417_08840	0.73	-0.5
1,923,281	-		PS417_08840	0.73	-1.2
1,923,440	-		PS417_08840	0.85	+2.1
1,923,541	+				+0.5
1,923,541	+				-0.3
1,923,541	+				-1.1
1,923,634	+				-0.7
1,923,635	-				-0.8
1,923,653	+				+0.7
1,923,653	+				+0.1
1,923,654	-				-1.1
1,923,657	+				+0.2
1,923,658	-				+0.4
1,923,658	-				+0.7
1,923,658	-				-1.7
1,923,674	+				+0.7
1,923,674	+				+3.0
1,923,674	+				-2.5
1,923,747	+				-1.3
1,923,747	+				-0.3
1,923,747	+				-0.1
1,923,748	-				+1.3
1,923,748	-				-0.0
1,923,748	-				+0.9
1,923,748	-				-0.6
1,923,775	+				+2.6
1,923,776	-				+0.6
1,923,776	-				-0.3
1,923,776	-				-1.5
1,923,776	-				-0.2
1,923,777	+				-0.1
1,923,777	+				+1.2
1,923,777	+				+1.5
1,923,778	-				-1.8
1,923,781	+				+1.6
1,923,798	+				-0.8
1,923,798	+				-0.4
1,923,799	-				+0.5
1,923,888	-				+0.3
1,923,897	+				-0.6
1,923,898	-				-1.1
1,923,898	-				-2.8
1,923,928	+		PS417_08845	0.17	-0.0
1,924,159	+		PS417_08845	0.80	-0.1
1,924,159	+		PS417_08845	0.80	+0.3
1,924,159	+		PS417_08845	0.80	-1.3
1,924,160	-		PS417_08845	0.80	+0.0
1,924,234	+				-0.2
1,924,300	+				-0.0
1,924,300	+				-0.6
1,924,400	-				-1.2
1,924,431	-				+0.9
1,924,827	+		PS417_08850	0.34	+0.1
1,924,827	+		PS417_08850	0.34	+0.1
1,924,828	-		PS417_08850	0.34	+0.5
1,924,884	+		PS417_08850	0.38	+0.9
1,924,895	-		PS417_08850	0.38	-1.0
1,924,963	+		PS417_08850	0.43	-0.4
1,925,027	-		PS417_08850	0.47	+1.2