Strain Fitness in Pseudomonas simiae WCS417 around PS417_08030

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
1,755,725	+		PS417_08025	0.27	+0.9
1,755,887	-		PS417_08025	0.41	-2.3
1,756,211	+		PS417_08025	0.68	+1.5
1,756,775	-		PS417_08030	0.23	-2.0
1,756,870	+		PS417_08030	0.33	+1.1
1,757,096	+		PS417_08030	0.58	-1.6
1,757,096	+		PS417_08030	0.58	+0.2
1,757,097	-		PS417_08030	0.58	-3.2
1,757,380	-		PS417_08030	0.89	-0.2
1,757,382	-		PS417_08030	0.89	-2.8
1,757,382	-		PS417_08030	0.89	-0.4
1,757,382	-		PS417_08030	0.89	-2.3
1,757,679	+				+1.5
1,757,679	+				+0.2
1,757,679	+				-0.0
1,757,679	+				+2.0
1,757,679	+				+1.0
1,757,679	+				+1.2
1,757,679	+				-0.3
1,757,680	-				-0.1
1,757,680	-				-0.0
1,757,680	-				-0.1
1,757,680	-				+0.1
1,757,680	-				-0.9
1,757,680	-				+1.3
1,757,680	-				-0.0
1,757,750	+		PS417_08035	0.12	-2.4
1,758,140	-		PS417_08035	0.45	+0.7
1,758,223	+		PS417_08035	0.52	-0.6
1,758,223	+		PS417_08035	0.52	-1.0
1,758,224	-		PS417_08035	0.52	-0.1
1,758,224	-		PS417_08035	0.52	+1.1
1,758,224	-		PS417_08035	0.52	-1.2
1,758,342	+		PS417_08035	0.62	-0.5
1,758,343	-		PS417_08035	0.62	-0.2
1,758,343	-		PS417_08035	0.62	+0.1
1,758,346	+		PS417_08035	0.62	-2.2
1,758,346	+		PS417_08035	0.62	-0.7
1,758,347	-		PS417_08035	0.62	-0.1
1,758,347	-		PS417_08035	0.62	+0.5
1,758,347	-		PS417_08035	0.62	-0.9
1,758,378	+		PS417_08035	0.65	-1.6
1,758,379	-		PS417_08035	0.65	+0.4
1,758,379	-		PS417_08035	0.65	-1.8
1,758,444	+		PS417_08035	0.70	-0.2