Strain Fitness in Pseudomonas simiae WCS417 around PS417_06580

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
1,456,806	+		PS417_06570	0.64	+0.5
1,456,831	-		PS417_06570	0.67	-0.7
1,456,928	+		PS417_06570	0.77	+0.0
1,456,947	+		PS417_06570	0.80	+0.6
1,456,947	+		PS417_06570	0.80	+0.2
1,456,948	-		PS417_06570	0.80	+1.7
1,456,948	-		PS417_06570	0.80	+0.4
1,456,948	-		PS417_06570	0.80	+0.1
1,457,025	+		PS417_06570	0.88	-0.8
1,457,198	+		PS417_06575	0.14	+0.3
1,457,198	+		PS417_06575	0.14	-1.0
1,457,553	+		PS417_06575	0.87	+0.1
1,457,609	-				-1.7
1,457,609	-				+1.6
1,457,620	+				+0.4
1,457,636	+				-0.1
1,457,668	+				+1.4
1,457,669	-				-0.3
1,457,729	-		PS417_06580	0.15	+1.5
1,457,787	+		PS417_06580	0.23	-0.2
1,458,075	-		PS417_06580	0.60	+1.8
1,458,131	+		PS417_06580	0.67	+1.4
1,458,217	+		PS417_06580	0.78	+0.5
1,458,217	+		PS417_06580	0.78	+0.4
1,458,217	+		PS417_06580	0.78	+0.1
1,458,217	+		PS417_06580	0.78	-0.3
1,458,217	+		PS417_06580	0.78	+0.6
1,458,217	+		PS417_06580	0.78	+1.5
1,458,218	-		PS417_06580	0.78	+1.2
1,458,504	+		PS417_06585	0.14	+0.8
1,458,504	+		PS417_06585	0.14	+1.0
1,458,645	+		PS417_06585	0.30	-4.2
1,458,650	-		PS417_06585	0.30	+0.6
1,458,688	+		PS417_06585	0.35	+0.1
1,458,688	+		PS417_06585	0.35	-1.4
1,458,688	+		PS417_06585	0.35	-1.0
1,458,688	+		PS417_06585	0.35	+0.5
1,458,688	+		PS417_06585	0.35	+0.7
1,458,689	-		PS417_06585	0.35	-0.8
1,458,689	-		PS417_06585	0.35	+0.0
1,458,788	-		PS417_06585	0.46	+1.6
1,458,788	-		PS417_06585	0.46	+0.8
1,458,834	+		PS417_06585	0.51	-0.0
1,459,058	-		PS417_06585	0.77	-1.6
1,459,081	+		PS417_06585	0.79	-2.4
1,459,111	+		PS417_06585	0.83	+0.2
1,459,111	+				+1.6
1,459,111	+		PS417_06585	0.83	+1.6
1,459,111	+		PS417_06585	0.83	+1.6
1,459,111	+		PS417_06585	0.83	+0.6
1,459,267	-				+0.7