Strain Fitness in Pseudomonas simiae WCS417 around PS417_05940

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
1,319,480	-		PS417_05935	0.35	+0.9
1,319,480	-		PS417_05935	0.35	-1.4
1,319,482	-		PS417_05935	0.36	+0.6
1,319,482	-		PS417_05935	0.36	+1.6
1,319,584	+		PS417_05935	0.45	-0.1
1,319,816	-		PS417_05935	0.68	+0.6
1,319,906	+		PS417_05935	0.77	+0.7
1,319,906	+		PS417_05935	0.77	-1.5
1,319,906	+		PS417_05935	0.77	-0.8
1,319,907	-		PS417_05935	0.77	+0.3
1,319,907	-		PS417_05935	0.77	-0.0
1,319,907	-		PS417_05935	0.77	-0.5
1,319,907	-		PS417_05935	0.77	+1.2
1,320,285	+				-2.7
1,320,286	-				-0.6
1,320,375	+				-0.3
1,320,376	-				-0.8
1,320,597	+		PS417_05940	0.21	+0.0
1,320,597	+		PS417_05940	0.21	-0.7
1,320,667	+		PS417_05940	0.28	-0.4
1,320,865	-		PS417_05940	0.45	+3.4
1,320,907	-		PS417_05940	0.48	+0.9
1,320,927	+		PS417_05940	0.50	-0.7
1,320,928	-		PS417_05940	0.50	-0.4
1,320,943	-		PS417_05940	0.51	+1.8
1,321,045	-		PS417_05940	0.60	+0.2
1,321,045	-		PS417_05940	0.60	+0.8
1,321,084	-		PS417_05940	0.64	+3.1
1,321,084	-		PS417_05940	0.64	+0.0
1,321,519	+				+2.6
1,321,523	+				-0.0
1,321,523	+				-1.0
1,321,524	-				+0.5
1,321,524	-				+0.4
1,321,563	+				+0.8
1,321,907	-		PS417_05945	0.23	+0.2
1,321,933	-		PS417_05945	0.25	-0.3
1,321,935	+				+0.6
1,321,935	+		PS417_05945	0.25	-1.1
1,321,936	-		PS417_05945	0.25	-0.9
1,321,936	-		PS417_05945	0.25	+0.2
1,321,936	-		PS417_05945	0.25	-0.9
1,322,151	+		PS417_05945	0.40	-0.2
1,322,190	+		PS417_05945	0.42	-0.2
1,322,191	-		PS417_05945	0.42	-0.5