Strain Fitness in Agrobacterium fabrum C58 around Atu4171

Experiment: Streptomycin 200 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Streptomycin 200 ug/mL
1,289,161	+				-0.6
1,289,237	-				+0.1
1,289,240	-				-1.2
1,289,392	+				+0.4
1,289,410	-				-1.3
1,289,487	-				+0.3
1,289,580	+				+1.2
1,289,629	+				+1.3
1,289,846	+		Atu4171	0.21	+1.4
1,289,846	+		Atu4171	0.21	+1.9
1,289,854	-		Atu4171	0.21	+1.7
1,289,873	+		Atu4171	0.22	+0.3
1,289,978	+		Atu4171	0.28	-0.8
1,290,025	-		Atu4171	0.31	+2.4
1,290,153	-		Atu4171	0.38	+2.4
1,290,208	-		Atu4171	0.40	+1.3
1,290,216	-		Atu4171	0.41	+1.1
1,290,320	+		Atu4171	0.47	+0.6
1,290,373	-		Atu4171	0.49	+1.1
1,290,449	+		Atu4171	0.54	+1.8
1,290,522	+		Atu4171	0.57	+1.2
1,290,631	+		Atu4171	0.63	+1.0
1,290,638	-		Atu4171	0.64	+1.0
1,291,020	-		Atu4171	0.84	+0.9
1,291,033	+		Atu4171	0.85	+1.2
1,291,072	+		Atu4171	0.87	+0.7
1,291,340	-		Atu8038	0.13	+0.2
1,291,357	+		Atu8038	0.19	-0.4
1,291,357	+		Atu8038	0.19	+1.2
1,291,357	+		Atu8038	0.19	-0.1
1,291,365	-		Atu8038	0.22	+0.0
1,291,365	-		Atu8038	0.22	+1.2
1,291,441	+		Atu8038	0.52	+0.8
1,291,449	-		Atu8038	0.55	+0.7
1,291,454	-		Atu8038	0.57	+0.5
1,291,459	-		Atu8038	0.59	-0.1
1,291,488	+		Atu8038	0.71	-0.4
1,291,488	+		Atu8038	0.71	+0.2
1,291,493	-		Atu8038	0.73	+1.4
1,291,513	-		Atu8038	0.80	-0.9
1,291,515	+		Atu8038	0.81	+0.9
1,291,556	-				+1.1
1,291,630	+				+0.4
1,291,684	+				+0.6