Strain Fitness in Agrobacterium fabrum C58 around Atu2808

Experiment: Streptomycin 200 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Streptomycin 200 ug/mL
2,809,947	+				+0.4
2,810,029	-				+1.4
2,810,066	-				-0.4
2,810,073	-				-0.4
2,810,181	+				-0.8
2,810,181	+				-0.1
2,810,181	+				+0.4
2,810,189	-				-0.4
2,810,189	-				+1.7
2,810,189	-				+0.3
2,810,189	-				+0.1
2,810,204	+				+0.7
2,810,212	-				-0.9
2,810,219	+				+0.4
2,810,227	-				-0.1
2,810,289	-				-0.3
2,810,304	+				-0.3
2,810,310	-				-0.2
2,810,332	-				-1.1
2,810,377	+				-0.9
2,810,558	+		Atu2807	0.38	-0.5
2,810,576	-		Atu2807	0.41	-0.7
2,810,604	+		Atu2807	0.46	-0.3
2,810,612	-		Atu2807	0.47	-0.4
2,810,668	+		Atu2807	0.56	-1.1
2,810,668	+		Atu2807	0.56	-2.3
2,810,676	-		Atu2807	0.57	-1.6
2,810,680	+		Atu2807	0.58	-1.1
2,810,680	+		Atu2807	0.58	-1.5
2,810,720	-		Atu2807	0.65	-1.1
2,810,729	+		Atu2807	0.66	-0.3
2,810,813	+		Atu2807	0.80	-0.1
2,810,873	+		Atu2807	0.89	-0.7
2,810,892	-				-1.1
2,810,915	+				-0.4
2,810,974	+				-1.1
2,811,004	-				+0.4
2,811,141	+		Atu2808	0.14	-1.4
2,811,142	-		Atu2808	0.14	-2.1
2,811,149	-		Atu2808	0.14	-0.1
2,811,175	+		Atu2808	0.16	-0.1
2,811,305	+		Atu2808	0.25	-0.0
2,811,392	+		Atu2808	0.31	-1.6
2,811,416	-		Atu2808	0.33	-1.8
2,811,475	+		Atu2808	0.37	-0.6
2,811,480	-		Atu2808	0.37	-1.1
2,811,517	-		Atu2808	0.40	-1.4
2,811,655	+		Atu2808	0.49	-1.6
2,811,655	-		Atu2808	0.49	-1.2
2,811,691	+		Atu2808	0.52	+0.4
2,811,711	+		Atu2808	0.53	-0.6
2,811,849	-		Atu2808	0.62	-1.8
2,811,996	-		Atu2808	0.72	-1.1
2,812,074	-		Atu2808	0.78	+1.4
2,812,326	+				+0.9
2,812,493	-		Atu2809	0.11	-1.4
2,812,587	+		Atu2809	0.21	-1.1
2,812,710	+		Atu2809	0.34	-1.4
2,812,710	+		Atu2809	0.34	-1.9
2,812,711	-		Atu2809	0.34	-0.2
2,812,718	-		Atu2809	0.35	+0.1
2,812,718	-		Atu2809	0.35	-1.4
2,812,718	-		Atu2809	0.35	-0.6
2,812,767	+		Atu2809	0.40	-0.9
2,812,832	+		Atu2809	0.46	-1.1
2,812,935	+		Atu2809	0.57	-0.4
2,812,943	-		Atu2809	0.58	-0.4
2,813,013	-		Atu2809	0.65	+2.4
2,813,037	+		Atu2809	0.68	-0.3
2,813,107	+		Atu2809	0.75	-0.9
2,813,142	+		Atu2809	0.78	-1.7
2,813,358	-				+0.1