Strain Fitness in Agrobacterium fabrum C58 around Atu2125
Experiment: Streptomycin 200 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Streptomycin 200 ug/mL |
|---|---|---|---|---|---|
| remove | |||||
| 2,088,603 | - | Atu2124 | 0.30 | -1.1 | |
| 2,088,603 | - | Atu2124 | 0.30 | -1.1 | |
| 2,088,740 | - | Atu2124 | 0.43 | -0.6 | |
| 2,088,922 | - | Atu2124 | 0.61 | -1.0 | |
| 2,089,007 | - | Atu2124 | 0.69 | -2.3 | |
| 2,089,026 | - | Atu2124 | 0.71 | +0.4 | |
| 2,089,755 | - | Atu2125 | 0.17 | +0.4 | |
| 2,090,034 | - | Atu2125 | 0.34 | +1.4 | |
| 2,090,153 | - | Atu2125 | 0.41 | -1.0 |
Or see this region's nucleotide sequence