Strain Fitness in Agrobacterium fabrum C58 around Atu2113

Experiment: Streptomycin 200 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Streptomycin 200 ug/mL
2,076,387	+				+0.6
2,076,431	+				-0.5
2,076,467	+				-0.2
2,076,546	-				-0.8
2,076,612	+		Atu2112	0.16	-0.2
2,076,617	+		Atu2112	0.17	-0.1
2,076,617	+		Atu2112	0.17	+2.3
2,076,627	-		Atu2112	0.19	-1.5
2,076,700	-		Atu2112	0.33	-0.2
2,076,711	-		Atu2112	0.35	+0.2
2,076,764	-		Atu2112	0.45	+0.4
2,076,769	-		Atu2112	0.46	+0.3
2,076,781	+		Atu2112	0.48	-0.1
2,076,802	-		Atu2112	0.52	-0.9
2,076,829	+		Atu2112	0.57	+0.1
2,076,846	-		Atu2112	0.60	+0.3
2,076,856	-		Atu2112	0.62	+0.5
2,076,856	-		Atu2112	0.62	+0.1
2,076,876	+		Atu2112	0.65	-0.7
2,076,957	-		Atu2112	0.80	-0.3
2,076,973	-		Atu2112	0.83	+0.5
2,076,973	-		Atu2112	0.83	+0.9
2,077,185	+				+0.5
2,077,333	+				-0.1
2,077,497	-		Atu2113	0.24	-0.6
2,077,584	-		Atu2113	0.35	-3.2
2,077,686	-		Atu2113	0.48	-1.0
2,077,961	+		Atu2113	0.83	-0.5
2,078,419	+		Atu2114	0.45	-1.2
2,078,474	-		Atu2114	0.53	-2.9
2,078,481	-		Atu2114	0.54	-1.2
2,078,503	+		Atu2114	0.57	-2.8
2,078,529	-		Atu2114	0.60	-1.0
2,078,702	+		Atu2114	0.83	-3.2
2,078,702	+		Atu2114	0.83	-0.6
2,078,710	-		Atu2114	0.85	+0.0
2,078,710	-		Atu2114	0.85	-3.2
2,078,750	-				-1.8