Strain Fitness in Agrobacterium fabrum C58 around Atu1380

Experiment: Streptomycin 200 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Streptomycin 200 ug/mL
1,373,097	+				+0.9
1,373,186	+				-0.9
1,373,218	+				-1.2
1,373,226	-				-1.4
1,373,329	-		Atu1380	0.13	-1.5
1,373,335	+		Atu1380	0.14	-0.8
1,373,460	-		Atu1380	0.25	-0.5
1,373,804	+		Atu1380	0.55	-2.7
1,373,819	-		Atu1380	0.56	-2.0
1,373,830	+		Atu1380	0.57	-2.4
1,373,936	+		Atu1380	0.67	-1.4
1,373,936	+		Atu1380	0.67	-2.4
1,373,944	-		Atu1380	0.67	-1.0
1,374,004	-		Atu1380	0.73	-1.2
1,374,131	+		Atu1380	0.84	-1.9
1,374,131	+		Atu1380	0.84	-1.6
1,374,145	-		Atu1380	0.85	-1.2
1,374,209	+				-0.9
1,374,291	+				-1.5