Strain Fitness in Agrobacterium fabrum C58 around Atu1303

Experiment: Streptomycin 200 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Streptomycin 200 ug/mL
1,290,920	-		Atu1301	0.59	-0.1
1,290,953	-		Atu1301	0.63	+0.1
1,291,001	-		Atu1301	0.70	+1.4
1,291,001	-		Atu1301	0.70	-0.0
1,291,211	-				+0.5
1,291,288	+		Atu1302	0.18	-0.6
1,291,325	+		Atu1302	0.27	+1.8
1,291,365	+		Atu1302	0.36	+1.0
1,291,497	+		Atu1302	0.66	+0.6
1,291,507	+		Atu1302	0.68	+0.4
1,291,547	-		Atu1302	0.77	+0.4
1,291,618	-				+0.1
1,291,618	-				+0.4
1,291,618	-				-0.2
1,291,632	+				+0.8
1,291,637	+				+0.7
1,291,650	-				+1.1
1,291,751	+				+1.0
1,292,016	-		Atu1303	0.14	+2.4
1,292,212	-		Atu1303	0.22	+2.9
1,292,276	+		Atu1303	0.25	+2.2
1,292,344	-		Atu1303	0.28	+1.9
1,292,424	-		Atu1303	0.31	+2.6
1,292,424	-		Atu1303	0.31	-0.2
1,292,430	-		Atu1303	0.31	+3.5
1,292,430	-		Atu1303	0.31	+2.8
1,292,473	+		Atu1303	0.33	+3.8
1,292,473	-		Atu1303	0.33	+2.1
1,292,491	-		Atu1303	0.34	+2.0
1,292,503	+		Atu1303	0.34	+0.9
1,292,503	+		Atu1303	0.34	+3.1
1,292,511	-		Atu1303	0.35	+2.0
1,292,624	-		Atu1303	0.40	+2.4
1,292,778	-		Atu1303	0.46	-0.2
1,292,821	+		Atu1303	0.48	+1.4
1,292,894	+		Atu1303	0.51	+2.4
1,292,930	+		Atu1303	0.53	+2.0
1,292,982	-		Atu1303	0.55	+2.9
1,292,997	+		Atu1303	0.55	+2.4
1,293,039	+		Atu1303	0.57	+2.3
1,293,045	-		Atu1303	0.57	+2.2
1,293,108	+		Atu1303	0.60	+2.4
1,293,210	-		Atu1303	0.64	+1.7
1,293,310	+		Atu1303	0.69	+2.9
1,293,372	-		Atu1303	0.71	+2.0
1,293,463	-		Atu1303	0.75	+2.5
1,293,546	-		Atu1303	0.79	+1.9
1,293,546	-		Atu1303	0.79	+2.2
1,293,548	+		Atu1303	0.79	+4.9
1,293,556	-		Atu1303	0.79	+2.2
1,293,814	+				+2.1
1,293,827	-				+1.7
1,293,951	+				+2.1
1,294,020	-				+2.3
1,294,030	-				+2.1