Strain Fitness in Agrobacterium fabrum C58 around Atu1285

Experiment: Streptomycin 200 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Streptomycin 200 ug/mL
1,271,990	-				-0.5
1,271,999	+				+0.3
1,272,756	+				-0.3
1,272,764	-				-0.6
1,272,801	+				-0.3
1,272,801	+				+0.1
1,272,809	-				-0.0
1,272,892	+				+0.5
1,272,892	+				+0.2
1,273,020	+				+1.7
1,273,035	+				+4.2
1,273,206	-		Atu1285	0.15	+2.4
1,273,439	+		Atu1285	0.29	+2.7
1,273,447	-		Atu1285	0.29	+2.1
1,273,488	-		Atu1285	0.32	+2.1
1,273,590	+		Atu1285	0.38	+2.6
1,273,616	-		Atu1285	0.39	+1.6
1,273,739	+		Atu1285	0.47	+4.0
1,273,742	-		Atu1285	0.47	+0.9
1,274,045	+		Atu1285	0.65	+2.2
1,274,053	-		Atu1285	0.66	+0.4
1,274,195	-		Atu1285	0.74	+2.1
1,274,196	+		Atu1285	0.74	+1.5
1,274,219	+		Atu1285	0.76	+2.7
1,274,219	+		Atu1285	0.76	+1.8
1,274,222	-		Atu1285	0.76	+2.0
1,274,227	-		Atu1285	0.76	-0.2
1,274,487	+				+2.4
1,274,492	+				+1.9
1,274,500	-				+2.5
1,274,583	-				+2.0
1,274,620	+				+1.7
1,274,625	+				+0.2
1,274,625	+				+1.0
1,274,675	+				+0.0
1,274,861	-		Atu1286	0.21	-0.5
1,274,971	+		Atu1286	0.62	-0.5
1,274,971	+		Atu1286	0.62	+0.6
1,274,996	-		Atu1286	0.71	+0.8
1,274,996	-		Atu1286	0.71	-0.3
1,275,148	-				+2.9
1,275,204	-		Atu1287	0.29	-0.0
1,275,384	-				-0.1
1,275,399	-				-1.0
1,275,464	-				-0.6
1,275,592	+				-0.3