Experiment: Streptomycin 200 ug/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu0272 and Atu0273 are separated by 96 nucleotides Atu0273 and Atu0274 are separated by 8 nucleotides Atu0274 and Atu0275 are separated by 88 nucleotides Atu0275 and Atu0276 are separated by 12 nucleotides
Atu0272: Atu0272 - transcriptional regulator, MarR family, at 268,711 to 269,196
Atu0272
Atu0273: Atu0273 - regulator protein pecM, at 269,293 to 270,156
Atu0273
Atu0274: Atu0274 - aminopeptidase, at 270,165 to 271,403
Atu0274
Atu0275: Atu0275 - hypothetical protein, at 271,492 to 271,968
Atu0275
Atu0276: Atu0276 - hypothetical protein, at 271,981 to 272,328
Atu0276
Position (kb) 270
271
272 Strain fitness (log2 ratio) -1
0
1 at 269.325 kb on + strand at 269.480 kb on + strand, within Atu0273 at 269.727 kb on - strand, within Atu0273 at 269.790 kb on - strand, within Atu0273 at 269.790 kb on - strand, within Atu0273 at 269.873 kb on + strand, within Atu0273 at 269.881 kb on - strand, within Atu0273 at 269.923 kb on + strand, within Atu0273 at 269.941 kb on - strand, within Atu0273 at 269.958 kb on + strand, within Atu0273 at 270.046 kb on + strand, within Atu0273 at 270.107 kb on - strand at 270.133 kb on - strand at 270.151 kb on + strand at 270.267 kb on - strand at 270.289 kb on + strand, within Atu0274 at 270.302 kb on - strand, within Atu0274 at 270.337 kb on + strand, within Atu0274 at 270.492 kb on - strand, within Atu0274 at 270.515 kb on - strand, within Atu0274 at 270.632 kb on + strand, within Atu0274 at 270.765 kb on - strand, within Atu0274 at 270.907 kb on - strand, within Atu0274 at 270.932 kb on + strand, within Atu0274 at 270.937 kb on + strand, within Atu0274 at 270.946 kb on + strand, within Atu0274 at 271.014 kb on - strand, within Atu0274 at 271.125 kb on - strand, within Atu0274 at 271.130 kb on - strand, within Atu0274 at 271.264 kb on + strand, within Atu0274 at 271.298 kb on + strand at 271.952 kb on - strand at 271.958 kb on + strand at 271.958 kb on + strand at 272.027 kb on + strand, within Atu0276 at 272.049 kb on - strand, within Atu0276 at 272.195 kb on + strand, within Atu0276 at 272.257 kb on + strand, within Atu0276 at 272.270 kb on - strand, within Atu0276 at 272.322 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Streptomycin 200 ug/mL remove 269,325 + -0.0 269,480 + Atu0273 0.22 +0.2 269,727 - Atu0273 0.50 -0.2 269,790 - Atu0273 0.58 +1.1 269,790 - Atu0273 0.58 -0.3 269,873 + Atu0273 0.67 -0.2 269,881 - Atu0273 0.68 -0.0 269,923 + Atu0273 0.73 +1.0 269,941 - Atu0273 0.75 +0.7 269,958 + Atu0273 0.77 +0.1 270,046 + Atu0273 0.87 +0.1 270,107 - -0.6 270,133 - -1.1 270,151 + -0.3 270,267 - -0.2 270,289 + Atu0274 0.10 -0.4 270,302 - Atu0274 0.11 -0.5 270,337 + Atu0274 0.14 -1.4 270,492 - Atu0274 0.26 -0.7 270,515 - Atu0274 0.28 -0.2 270,632 + Atu0274 0.38 +1.4 270,765 - Atu0274 0.48 -0.3 270,907 - Atu0274 0.60 +0.7 270,932 + Atu0274 0.62 -0.8 270,937 + Atu0274 0.62 -0.8 270,946 + Atu0274 0.63 -0.7 271,014 - Atu0274 0.69 -0.0 271,125 - Atu0274 0.77 -1.7 271,130 - Atu0274 0.78 -0.8 271,264 + Atu0274 0.89 -1.2 271,298 + +0.6 271,952 - +1.2 271,958 + -0.1 271,958 + +0.0 272,027 + Atu0276 0.13 +0.8 272,049 - Atu0276 0.20 +0.2 272,195 + Atu0276 0.61 +0.4 272,257 + Atu0276 0.79 +0.7 272,270 - Atu0276 0.83 +0.6 272,322 + -0.9
Or see this region's nucleotide sequence