Strain Fitness in Agrobacterium fabrum C58 around Atu0010

Experiment: Streptomycin 200 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Streptomycin 200 ug/mL
5,990	-		Atu0009	0.11	-0.6
6,003	+		Atu0009	0.12	-0.2
6,055	-		Atu0009	0.17	-0.5
6,098	+		Atu0009	0.21	-0.3
6,165	-		Atu0009	0.27	-1.8
6,172	+		Atu0009	0.28	-0.6
6,224	-		Atu0009	0.32	-0.6
6,289	-		Atu0009	0.38	-0.1
6,289	-		Atu0009	0.38	-0.8
6,435	+		Atu0009	0.51	-0.6
6,435	+		Atu0009	0.51	-0.9
6,527	-		Atu0009	0.59	-0.4
6,538	-		Atu0009	0.60	-1.6
6,660	+		Atu0009	0.71	+2.4
6,710	-		Atu0009	0.76	-1.5
6,742	+		Atu0009	0.79	-0.8
6,801	-		Atu0009	0.84	+0.2
6,827	+		Atu0009	0.86	+0.4
6,920	-				-0.6
7,026	-				-0.6
7,098	+		Atu0010	0.22	-0.9
7,148	+		Atu0010	0.31	-1.0
7,200	+		Atu0010	0.40	+0.8
7,200	-		Atu0010	0.40	-0.2
7,208	-		Atu0010	0.41	-1.2
7,228	+		Atu0010	0.45	-0.9
7,271	+		Atu0010	0.52	-0.8
7,334	+		Atu0010	0.63	+0.4
7,363	-		Atu0010	0.68	-0.3
7,378	-		Atu0010	0.71	-0.8
7,378	-		Atu0010	0.71	-0.8
7,378	-		Atu0010	0.71	-1.0
7,378	-		Atu0010	0.71	-0.2
7,405	+		Atu0010	0.76	-0.2
7,410	+		Atu0010	0.76	-1.0
7,423	-		Atu0010	0.79	-2.1
7,761	+		Atu0011	0.60	-0.9
7,800	+		Atu0011	0.71	-1.2
7,812	+		Atu0011	0.74	-0.6
7,866	+		Atu0011	0.89	-0.2
7,910	+				-0.4
7,922	+				+0.1