Strain Fitness in Agrobacterium fabrum C58 around Atu2315

Experiment: Streptomycin 200 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Streptomycin 200 ug/mL
2,292,089	-		Atu2314	0.23	-0.5
2,292,112	-		Atu2314	0.25	-0.3
2,292,148	-		Atu2314	0.28	+0.5
2,292,148	-		Atu2314	0.28	+0.3
2,292,148	-		Atu2314	0.28	-0.5
2,292,150	+		Atu2314	0.28	-0.7
2,292,150	+		Atu2314	0.28	+0.8
2,292,150	+		Atu2314	0.28	-1.0
2,292,150	+		Atu2314	0.28	-1.1
2,292,158	-		Atu2314	0.29	-1.6
2,292,158	-		Atu2314	0.29	-0.1
2,292,237	+		Atu2314	0.35	+1.0
2,292,296	-		Atu2314	0.40	+0.4
2,292,308	-		Atu2314	0.41	-1.9
2,292,482	+		Atu2314	0.54	-0.3
2,292,526	+		Atu2314	0.58	+0.9
2,292,563	-		Atu2314	0.61	-0.6
2,292,575	+		Atu2314	0.62	+0.0
2,292,603	+		Atu2314	0.64	-0.1
2,292,603	+		Atu2314	0.64	-0.7
2,292,616	-		Atu2314	0.65	+1.5
2,292,616	-		Atu2314	0.65	-0.1
2,292,621	-		Atu2314	0.65	+0.0
2,292,621	-		Atu2314	0.65	-0.8
2,292,666	-		Atu2314	0.69	+1.5
2,292,743	+		Atu2314	0.75	+0.1
2,292,807	-		Atu2314	0.80	-0.7
2,292,812	+		Atu2314	0.81	+1.1
2,292,999	-				-1.5
2,293,055	-				-0.4
2,293,111	-				-0.5
2,293,295	+		Atu2315	0.18	-0.8
2,293,384	+		Atu2315	0.25	-1.5
2,293,392	-		Atu2315	0.26	+0.0
2,293,452	+		Atu2315	0.30	-0.5
2,293,454	+		Atu2315	0.31	-0.1
2,293,454	+		Atu2315	0.31	-1.3
2,293,454	+		Atu2315	0.31	-1.1
2,293,460	-		Atu2315	0.31	-2.9
2,293,460	-		Atu2315	0.31	+0.5
2,293,460	-		Atu2315	0.31	-0.4
2,293,462	-		Atu2315	0.31	-0.8
2,293,472	-		Atu2315	0.32	-0.6
2,293,534	+		Atu2315	0.37	-0.5
2,293,554	+		Atu2315	0.38	-0.1
2,293,555	-		Atu2315	0.38	-0.7
2,293,578	+		Atu2315	0.40	-0.5
2,293,602	+		Atu2315	0.42	-0.3
2,293,622	+		Atu2315	0.43	-0.9
2,293,640	-		Atu2315	0.45	-1.8
2,293,678	+		Atu2315	0.48	+0.5
2,293,696	-		Atu2315	0.49	-0.8
2,293,856	-		Atu2315	0.61	-0.2
2,293,872	-		Atu2315	0.62	+0.1
2,293,930	-		Atu2315	0.67	-0.3
2,293,951	+		Atu2315	0.68	+0.1
2,294,041	+		Atu2315	0.75	-1.0
2,294,041	+		Atu2315	0.75	-0.7
2,294,049	-		Atu2315	0.76	-2.1
2,294,176	-		Atu2315	0.86	-0.7
2,294,218	-		Atu2315	0.89	-0.1
2,294,218	-		Atu2315	0.89	-0.3
2,294,246	+				-0.7
2,294,253	-				-0.7
2,294,321	-				-0.4
2,294,340	+				-0.2
2,294,348	-				-0.6
2,294,491	-				-0.3
2,294,491	-				-0.3
2,294,531	-				+0.8
2,294,567	-				+1.0
2,294,576	+				+0.6
2,294,591	+				-0.0
2,294,595	+				+0.2
2,294,601	+				+0.2
2,294,758	-		Atu2316	0.27	-0.5
2,294,847	-		Atu2316	0.40	-0.1
2,294,928	-		Atu2316	0.52	-0.3
2,294,977	-		Atu2316	0.59	-0.3
2,295,001	-		Atu2316	0.63	+0.2
2,295,017	+		Atu2316	0.65	-0.1
2,295,064	-		Atu2316	0.72	-0.5
2,295,188	+				+0.3
2,295,228	+				+0.5
2,295,251	-				+0.8
2,295,332	-				-0.5
2,295,337	+				-0.7
2,295,345	-		Atu2317	0.11	+0.9