Strain Fitness in Agrobacterium fabrum C58 around Atu0084
Experiment: Streptomycin 200 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Streptomycin 200 ug/mL |
|---|---|---|---|---|---|
| remove | |||||
| 87,339 | - | +0.6 | |||
| 87,365 | + | +0.4 | |||
| 87,382 | + | +1.6 | |||
| 87,437 | - | Atu0085 | 0.14 | -0.8 | |
| 87,442 | - | Atu0085 | 0.14 | -0.6 | |
| 87,452 | - | Atu0085 | 0.15 | -0.2 | |
| 87,465 | - | Atu0085 | 0.17 | -0.9 | |
| 87,609 | - | Atu0085 | 0.32 | +2.6 | |
| 87,751 | + | Atu0085 | 0.47 | +2.2 | |
| 87,832 | - | Atu0085 | 0.55 | +2.0 | |
| 87,862 | - | Atu0085 | 0.59 | +3.2 |
Or see this region's nucleotide sequence