Strain Fitness in Agrobacterium fabrum C58 around Atu4794

Experiment: Timentin 6.25 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Timentin 6.25 ug/mL
1,967,802	-		Atu4793	0.21	-0.1
1,967,859	-		Atu4793	0.26	-0.7
1,967,877	+		Atu4793	0.27	+0.1
1,967,929	+		Atu4793	0.31	+0.3
1,967,959	+		Atu4793	0.33	-0.1
1,967,959	+		Atu4793	0.33	+0.6
1,967,967	-		Atu4793	0.34	-0.1
1,967,972	+		Atu4793	0.35	-0.5
1,967,998	-		Atu4793	0.37	-0.2
1,968,016	+		Atu4793	0.38	+0.2
1,968,017	-		Atu4793	0.38	+1.7
1,968,018	-		Atu4793	0.38	-0.7
1,968,024	-		Atu4793	0.39	-0.1
1,968,111	+		Atu4793	0.46	+0.3
1,968,187	+		Atu4793	0.52	+0.2
1,968,325	-		Atu4793	0.63	+0.1
1,968,327	+		Atu4793	0.63	+0.4
1,968,376	+		Atu4793	0.67	+0.6
1,968,405	-		Atu4793	0.69	-0.5
1,968,448	-		Atu4793	0.72	-0.4
1,968,472	-		Atu4793	0.74	-1.2
1,968,528	+		Atu4793	0.79	-1.4
1,968,533	+		Atu4793	0.79	-0.3
1,968,589	+		Atu4793	0.83	-0.4
1,968,602	+		Atu4793	0.85	-0.1
1,968,623	+		Atu4793	0.86	-0.4
1,968,645	-		Atu4793	0.88	+0.3
1,968,670	-		Atu4793	0.90	-0.3
1,968,744	-				+0.1
1,968,771	+				+0.7
1,968,771	+				-0.4
1,968,779	-				+1.7
1,968,938	+				-0.4
1,969,008	+				+0.2
1,969,231	+		Atu4794	0.20	-0.3
1,969,231	+		Atu4794	0.20	-0.7
1,969,231	+		Atu4794	0.20	-0.6
1,969,231	+		Atu4794	0.20	-0.1
1,969,231	+		Atu4794	0.20	-0.5
1,969,239	-		Atu4794	0.20	-1.0
1,969,239	-		Atu4794	0.20	-0.2
1,969,252	+		Atu4794	0.21	+0.4
1,969,260	-		Atu4794	0.21	+0.0
1,969,260	-		Atu4794	0.21	-1.1
1,969,376	+		Atu4794	0.27	-0.5
1,969,398	+		Atu4794	0.28	+0.0
1,969,398	+		Atu4794	0.28	-0.8
1,969,469	+		Atu4794	0.31	+0.1
1,969,470	+		Atu4794	0.31	+0.6
1,969,470	+		Atu4794	0.31	-1.7
1,969,470	+		Atu4794	0.31	-0.5
1,969,470	+		Atu4794	0.31	-0.0
1,969,478	-		Atu4794	0.31	+0.1
1,969,478	-		Atu4794	0.31	-0.2
1,969,478	-		Atu4794	0.31	+0.2
1,969,632	-		Atu4794	0.38	-0.4
1,969,657	+		Atu4794	0.40	+0.0
1,969,694	+		Atu4794	0.41	-0.5
1,969,694	+		Atu4794	0.41	+0.4
1,969,720	+		Atu4794	0.43	-0.1
1,969,770	+		Atu4794	0.45	-0.3
1,969,814	+		Atu4794	0.47	-0.1
1,969,913	-		Atu4794	0.51	+0.3
1,970,022	-		Atu4794	0.56	-0.3
1,970,054	-		Atu4794	0.58	+0.1
1,970,203	+		Atu4794	0.65	+0.3
1,970,217	+		Atu4794	0.66	-0.3
1,970,259	-		Atu4794	0.67	-0.7
1,970,283	+		Atu4794	0.69	+0.4
1,970,289	+		Atu4794	0.69	+1.3
1,970,297	-		Atu4794	0.69	-0.6
1,970,398	+		Atu4794	0.74	-0.4
1,970,443	+		Atu4794	0.76	+0.3
1,970,506	-		Atu4794	0.79	-0.1
1,970,508	+		Atu4794	0.79	-0.4
1,970,516	-		Atu4794	0.79	-0.4
1,970,516	-		Atu4794	0.79	-0.6
1,970,543	+		Atu4794	0.81	+0.0
1,970,544	+		Atu4794	0.81	-1.3
1,970,563	+		Atu4794	0.82	+0.3
1,970,739	+		Atu4794	0.90	-0.5
1,970,873	+				+0.4
1,970,881	-				+0.3
1,970,883	+				-0.3
1,970,926	-				+0.5
1,970,990	+				-0.2
1,971,023	-				+0.3
1,971,035	-				-0.3
1,971,098	+		Atu4795	0.11	-0.6
1,971,135	-		Atu4795	0.17	-0.3
1,971,141	+		Atu4795	0.17	-0.4
1,971,242	+		Atu4795	0.32	-0.1
1,971,277	+		Atu4795	0.37	-0.7
1,971,313	+		Atu4795	0.42	+0.0
1,971,346	+		Atu4795	0.46	+1.3
1,971,346	+		Atu4795	0.46	-1.1
1,971,346	+		Atu4795	0.46	-0.1
1,971,354	-		Atu4795	0.47	+0.2
1,971,354	-		Atu4795	0.47	-0.1
1,971,354	-		Atu4795	0.47	+1.3
1,971,361	+		Atu4795	0.48	-0.3
1,971,361	+		Atu4795	0.48	+0.3
1,971,361	+		Atu4795	0.48	+0.3
1,971,361	+		Atu4795	0.48	-0.7
1,971,369	-		Atu4795	0.50	-0.3
1,971,457	-		Atu4795	0.62	+0.4
1,971,497	+		Atu4795	0.68	-0.4
1,971,497	+		Atu4795	0.68	-0.2
1,971,497	+		Atu4795	0.68	-0.4
1,971,505	-		Atu4795	0.69	-0.1
1,971,505	-		Atu4795	0.69	-0.1
1,971,505	-		Atu4795	0.69	+0.2
1,971,563	+		Atu4795	0.77	+0.5
1,971,571	-		Atu4795	0.78	+0.1
1,971,571	-		Atu4795	0.78	-0.2
1,971,571	-		Atu4795	0.78	-0.4
1,971,571	-		Atu4795	0.78	+0.4
1,971,571	-		Atu4795	0.78	-1.1
1,971,783	+				-0.3
1,971,794	+				+1.3
1,971,829	-				-0.9
1,971,872	-				-0.3
1,971,927	-		Atu4796	0.18	+0.5
1,971,939	+		Atu4796	0.19	+0.5