Strain Fitness in Agrobacterium fabrum C58 around Atu4793

Experiment: Timentin 6.25 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Timentin 6.25 ug/mL
1,966,575	+				+1.3
1,966,634	+				+0.0
1,966,687	-				-1.1
1,966,755	-				-0.5
1,966,836	-				-0.4
1,966,844	-				-0.1
1,966,867	-				-0.3
1,966,867	-				+0.0
1,966,932	+				+0.1
1,966,932	+				-1.1
1,966,932	-				+0.2
1,967,021	-				-0.3
1,967,058	+		Atu4792	0.14	-0.9
1,967,078	+		Atu4792	0.21	-1.1
1,967,086	-		Atu4792	0.23	-1.3
1,967,230	+		Atu4792	0.72	+0.5
1,967,316	-				+0.1
1,967,371	+				+0.2
1,967,396	+				-0.6
1,967,438	+				-0.1
1,967,532	+				+0.1
1,967,535	-				+0.3
1,967,588	-				-0.4
1,967,627	-				-0.4
1,967,632	-				-0.4
1,967,795	-		Atu4793	0.20	-0.5
1,967,802	-		Atu4793	0.21	-0.1
1,967,859	-		Atu4793	0.26	-0.7
1,967,877	+		Atu4793	0.27	+0.1
1,967,929	+		Atu4793	0.31	+0.3
1,967,959	+		Atu4793	0.33	-0.1
1,967,959	+		Atu4793	0.33	+0.6
1,967,967	-		Atu4793	0.34	-0.1
1,967,972	+		Atu4793	0.35	-0.5
1,967,998	-		Atu4793	0.37	-0.2
1,968,016	+		Atu4793	0.38	+0.2
1,968,017	-		Atu4793	0.38	+1.7
1,968,018	-		Atu4793	0.38	-0.7
1,968,024	-		Atu4793	0.39	-0.1
1,968,111	+		Atu4793	0.46	+0.3
1,968,187	+		Atu4793	0.52	+0.2
1,968,325	-		Atu4793	0.63	+0.1
1,968,327	+		Atu4793	0.63	+0.4
1,968,376	+		Atu4793	0.67	+0.6
1,968,405	-		Atu4793	0.69	-0.5
1,968,448	-		Atu4793	0.72	-0.4
1,968,472	-		Atu4793	0.74	-1.2
1,968,528	+		Atu4793	0.79	-1.4
1,968,533	+		Atu4793	0.79	-0.3
1,968,589	+		Atu4793	0.83	-0.4
1,968,602	+		Atu4793	0.85	-0.1
1,968,623	+		Atu4793	0.86	-0.4
1,968,645	-		Atu4793	0.88	+0.3
1,968,670	-		Atu4793	0.90	-0.3
1,968,744	-				+0.1
1,968,771	+				+0.7
1,968,771	+				-0.4
1,968,779	-				+1.7
1,968,938	+				-0.4
1,969,008	+				+0.2
1,969,231	+		Atu4794	0.20	-0.3
1,969,231	+		Atu4794	0.20	-0.7
1,969,231	+		Atu4794	0.20	-0.6
1,969,231	+		Atu4794	0.20	-0.1
1,969,231	+		Atu4794	0.20	-0.5
1,969,239	-		Atu4794	0.20	-1.0
1,969,239	-		Atu4794	0.20	-0.2
1,969,252	+		Atu4794	0.21	+0.4
1,969,260	-		Atu4794	0.21	+0.0
1,969,260	-		Atu4794	0.21	-1.1
1,969,376	+		Atu4794	0.27	-0.5
1,969,398	+		Atu4794	0.28	+0.0
1,969,398	+		Atu4794	0.28	-0.8
1,969,469	+		Atu4794	0.31	+0.1
1,969,470	+		Atu4794	0.31	+0.6
1,969,470	+		Atu4794	0.31	-1.7
1,969,470	+		Atu4794	0.31	-0.5
1,969,470	+		Atu4794	0.31	-0.0
1,969,478	-		Atu4794	0.31	+0.1
1,969,478	-		Atu4794	0.31	-0.2
1,969,478	-		Atu4794	0.31	+0.2
1,969,632	-		Atu4794	0.38	-0.4
1,969,657	+		Atu4794	0.40	+0.0
1,969,694	+		Atu4794	0.41	-0.5
1,969,694	+		Atu4794	0.41	+0.4
1,969,720	+		Atu4794	0.43	-0.1
1,969,770	+		Atu4794	0.45	-0.3