Strain Fitness in Agrobacterium fabrum C58 around Atu0785
Experiment: Timentin 6.25 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Timentin 6.25 ug/mL |
|---|---|---|---|---|---|
| remove | |||||
| 782,518 | - | -0.8 | |||
| 782,757 | - | Atu0785 | 0.42 | -0.3 | |
| 782,779 | - | Atu0785 | 0.46 | -0.6 | |
| 782,794 | + | Atu0785 | 0.48 | -0.9 | |
| 782,797 | - | Atu0785 | 0.48 | -1.0 | |
| 782,802 | - | Atu0785 | 0.49 | -1.2 | |
| 783,046 | - | +0.2 | |||
| 783,051 | + | +0.6 | |||
| 783,064 | - | -0.1 | |||
| 783,066 | + | -0.5 | |||
| 783,125 | - | -0.3 | |||
| 783,210 | + | -0.6 | |||
| 783,210 | + | +0.0 | |||
| 783,337 | + | Atu0786 | 0.11 | +0.3 | |
| 783,682 | - | Atu0786 | 0.37 | +0.8 | |
| 783,860 | - | Atu0786 | 0.51 | -0.3 |
Or see this region's nucleotide sequence