Strain Fitness in Agrobacterium fabrum C58 around Atu2054

Experiment: Timentin 6.25 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Timentin 6.25 ug/mL
2,013,731	+		Atu2053	0.40	+1.0
2,013,750	+		Atu2053	0.41	+0.4
2,013,758	-		Atu2053	0.42	-0.2
2,013,758	-		Atu2053	0.42	-0.4
2,013,788	-		Atu2053	0.44	+0.1
2,013,840	+		Atu2053	0.47	+0.2
2,013,876	+		Atu2053	0.50	+0.5
2,013,933	+		Atu2053	0.54	+1.2
2,013,941	-		Atu2053	0.54	-0.4
2,014,018	+		Atu2053	0.60	-1.1
2,014,018	+		Atu2053	0.60	+0.7
2,014,041	-		Atu2053	0.62	+1.0
2,014,093	+		Atu2053	0.65	+1.2
2,014,237	-		Atu2053	0.75	+0.5
2,014,251	-		Atu2053	0.76	+0.0
2,014,311	-		Atu2053	0.81	-1.6
2,014,349	-		Atu2053	0.83	-0.2
2,014,350	-		Atu2053	0.83	-0.3
2,014,354	+		Atu2053	0.84	+0.3
2,014,436	+		Atu2053	0.90	+1.0
2,014,476	+				+0.3
2,014,484	-				-0.1
2,014,659	+				+0.8
2,014,667	-				+0.3
2,014,715	+				+0.4
2,014,719	-				-0.2
2,014,842	-				-0.5
2,014,859	-				-0.4
2,014,935	-				+2.8
2,015,016	-				-0.1
2,015,046	-		Atu2054	0.11	-0.7
2,015,052	+		Atu2054	0.11	-0.7
2,015,114	+		Atu2054	0.13	+0.7
2,015,119	+		Atu2054	0.13	-1.1
2,015,129	+		Atu2054	0.13	+0.2
2,015,223	-		Atu2054	0.16	-1.1
2,015,249	+		Atu2054	0.17	+0.1
2,015,254	+		Atu2054	0.17	-1.4
2,015,416	+		Atu2054	0.22	-0.8
2,015,416	+		Atu2054	0.22	-0.9
2,015,424	-		Atu2054	0.23	-0.7
2,015,521	+		Atu2054	0.26	-0.7
2,015,529	-		Atu2054	0.26	-0.2
2,015,529	-		Atu2054	0.26	-0.7
2,015,908	+		Atu2054	0.38	-1.0
2,015,916	-		Atu2054	0.38	-0.6
2,015,944	+		Atu2054	0.39	-0.1
2,015,998	-		Atu2054	0.41	-1.2
2,016,059	-		Atu2054	0.43	-0.5
2,016,131	+		Atu2054	0.45	-0.5
2,016,139	-		Atu2054	0.45	-0.2
2,016,139	-		Atu2054	0.45	-0.2
2,016,217	-		Atu2054	0.48	-0.8
2,016,226	+		Atu2054	0.48	-0.4
2,016,234	-		Atu2054	0.48	-1.1
2,016,234	-		Atu2054	0.48	+0.5
2,016,234	-		Atu2054	0.48	-0.4
2,016,254	-		Atu2054	0.49	-1.9
2,016,296	+		Atu2054	0.50	-0.6
2,016,323	-		Atu2054	0.51	+0.3
2,016,339	+		Atu2054	0.52	-0.0
2,016,387	-		Atu2054	0.53	-0.1
2,016,391	+		Atu2054	0.53	+0.2
2,016,410	-		Atu2054	0.54	-0.5
2,016,446	-		Atu2054	0.55	+0.2
2,016,512	-		Atu2054	0.57	-0.7
2,016,524	+		Atu2054	0.58	+0.5
2,016,551	-		Atu2054	0.58	+0.5
2,016,626	+		Atu2054	0.61	+0.0
2,016,841	+		Atu2054	0.68	-1.2
2,016,919	-		Atu2054	0.70	-2.2
2,016,939	+		Atu2054	0.71	-0.4
2,016,972	-		Atu2054	0.72	-0.4
2,016,992	-		Atu2054	0.72	-0.2
2,017,003	-		Atu2054	0.73	+0.0
2,017,018	-		Atu2054	0.73	+0.9
2,017,048	-		Atu2054	0.74	+0.9
2,017,081	+		Atu2054	0.75	-0.4
2,017,084	-		Atu2054	0.75	+1.2
2,017,147	+		Atu2054	0.77	-1.0
2,017,152	+		Atu2054	0.78	+1.2
2,017,153	-		Atu2054	0.78	-1.0
2,017,211	-		Atu2054	0.79	-1.6
2,017,373	+		Atu2054	0.85	+0.8
2,017,393	-		Atu2054	0.85	-0.5
2,017,451	-		Atu2054	0.87	-0.8
2,017,496	-		Atu2054	0.88	-1.3
2,017,505	+		Atu2054	0.89	-0.3
2,017,550	-				-1.0
2,017,630	-				-0.7
2,017,659	-				-1.5
2,017,671	+				-1.1
2,017,735	-				+0.5
2,017,790	+				-0.9
2,017,873	+				-1.5
2,017,880	-				+0.5
2,017,914	+				+1.2
2,017,968	+				-0.6
2,017,989	+		Atu2055	0.12	-0.7
2,017,997	-		Atu2055	0.12	+1.2
2,018,095	+		Atu2055	0.21	-1.5
2,018,104	-		Atu2055	0.22	-0.0
2,018,183	+		Atu2055	0.28	+0.2
2,018,226	+		Atu2055	0.32	+0.5
2,018,248	-		Atu2055	0.34	+0.1
2,018,521	+		Atu2055	0.58	-0.0
2,018,529	-		Atu2055	0.58	+1.2
2,018,574	+		Atu2055	0.62	-0.4
2,018,606	+		Atu2055	0.65	+0.0
2,018,620	+		Atu2055	0.66	-0.8
2,018,636	+		Atu2055	0.68	-0.4