Strain Fitness in Agrobacterium fabrum C58 around Atu2006

Experiment: Timentin 6.25 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Timentin 6.25 ug/mL
1,967,751	+		Atu2004	0.65	-0.0
1,967,813	+		Atu2004	0.78	-0.3
1,967,867	+				-0.2
1,967,917	-				+0.4
1,968,016	-				-0.8
1,968,025	-				-0.8
1,968,041	-				-0.3
1,968,144	+				+0.1
1,968,201	+		Atu2005	0.17	-0.2
1,968,209	-		Atu2005	0.18	-0.3
1,968,239	+		Atu2005	0.23	-0.5
1,968,247	-		Atu2005	0.24	+0.3
1,968,347	-		Atu2005	0.41	-0.5
1,968,363	-		Atu2005	0.43	+0.5
1,968,371	+		Atu2005	0.44	-0.1
1,968,387	+		Atu2005	0.47	+0.3
1,968,396	-		Atu2005	0.49	-0.3
1,968,396	-		Atu2005	0.49	-0.8
1,968,406	-		Atu2005	0.50	-1.2
1,968,470	+		Atu2005	0.61	-0.3
1,968,525	+		Atu2005	0.70	-0.4
1,968,525	+		Atu2005	0.70	+0.5
1,968,525	+		Atu2005	0.70	+0.1
1,968,531	-		Atu2005	0.71	-0.6
1,968,611	-		Atu2005	0.84	+1.0
1,968,724	-				-0.1
1,968,780	+		Atu2006	0.10	-1.8
1,968,798	+		Atu2006	0.13	-1.1
1,968,798	+		Atu2006	0.13	+0.9
1,968,798	+		Atu2006	0.13	-3.0
1,968,798	+		Atu2006	0.13	-1.2
1,968,806	-		Atu2006	0.14	-2.7
1,968,806	-		Atu2006	0.14	-0.4
1,968,806	-		Atu2006	0.14	-1.9
1,968,806	-		Atu2006	0.14	-0.7
1,968,877	+		Atu2006	0.26	-2.6
1,968,885	-		Atu2006	0.28	-0.9
1,968,920	+		Atu2006	0.33	-1.6
1,969,056	-		Atu2006	0.56	+0.2
1,969,139	+		Atu2006	0.70	-1.7
1,969,155	-		Atu2006	0.72	-1.0
1,969,231	-		Atu2006	0.85	-1.8
1,969,236	+		Atu2006	0.86	-2.6
1,969,371	+				-0.7
1,969,379	-				-1.4
1,969,408	-				-1.4
1,969,412	+				-1.7
1,969,456	+				-1.4
1,969,597	+				-1.2
1,969,609	+				-0.6
1,969,627	-				+0.6
1,969,724	-				-1.1
1,969,736	+				-0.7
1,969,756	-		Atu8168	0.14	-0.5
1,969,763	+		Atu8168	0.16	-0.4
1,969,808	+		Atu8168	0.29	-0.2
1,969,962	-		Atu8168	0.72	-1.2
1,970,061	-				-0.1
1,970,063	+				+0.5