Experiment: Timentin 6.25 ug/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu1022 and Atu1023 are separated by 22 nucleotides Atu1023 and Atu1024 are separated by 64 nucleotides
Atu1022: Atu1022 - soluble lytic transglycosylase, at 1,015,197 to 1,017,245
Atu1022
Atu1023: Atu1023 - hypothetical protein, at 1,017,268 to 1,017,564
Atu1023
Atu1024: Atu1024 - dihydrodipicolinate synthase, at 1,017,629 to 1,018,513
Atu1024
Position (kb)
1017
1018 Strain fitness (log2 ratio)
-2
-1
0
1 at 1016.433 kb on - strand, within Atu1022 at 1016.478 kb on - strand, within Atu1022 at 1016.478 kb on - strand, within Atu1022 at 1016.484 kb on - strand, within Atu1022 at 1016.519 kb on - strand, within Atu1022 at 1016.577 kb on - strand, within Atu1022 at 1016.615 kb on - strand, within Atu1022 at 1016.778 kb on - strand, within Atu1022 at 1016.895 kb on + strand, within Atu1022 at 1017.004 kb on + strand, within Atu1022 at 1017.004 kb on + strand, within Atu1022 at 1017.004 kb on + strand, within Atu1022 at 1017.004 kb on + strand, within Atu1022 at 1017.012 kb on - strand, within Atu1022 at 1017.058 kb on - strand at 1017.061 kb on + strand at 1017.069 kb on - strand at 1017.098 kb on - strand at 1017.166 kb on + strand at 1017.171 kb on + strand at 1017.171 kb on + strand at 1017.174 kb on - strand at 1017.179 kb on - strand at 1017.180 kb on + strand at 1017.187 kb on + strand at 1017.197 kb on - strand at 1017.385 kb on - strand, within Atu1023 at 1017.558 kb on + strand at 1018.517 kb on - strand at 1018.552 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Timentin 6.25 ug/mL remove 1,016,433 - Atu1022 0.60 +0.2 1,016,478 - Atu1022 0.63 +0.2 1,016,478 - Atu1022 0.63 -0.9 1,016,484 - Atu1022 0.63 -1.0 1,016,519 - Atu1022 0.65 +0.2 1,016,577 - Atu1022 0.67 -0.1 1,016,615 - Atu1022 0.69 -0.6 1,016,778 - Atu1022 0.77 -0.6 1,016,895 + Atu1022 0.83 -0.7 1,017,004 + Atu1022 0.88 -0.3 1,017,004 + Atu1022 0.88 -1.8 1,017,004 + Atu1022 0.88 -0.0 1,017,004 + Atu1022 0.88 -1.4 1,017,012 - Atu1022 0.89 -0.2 1,017,058 - -0.7 1,017,061 + -0.1 1,017,069 - +0.2 1,017,098 - -0.8 1,017,166 + -0.2 1,017,171 + -0.4 1,017,171 + -1.6 1,017,174 - -0.2 1,017,179 - +0.0 1,017,180 + -0.1 1,017,187 + -1.0 1,017,197 - -1.5 1,017,385 - Atu1023 0.39 -0.8 1,017,558 + +0.4 1,018,517 - +1.2 1,018,552 + +0.4
Or see this region's nucleotide sequence