Experiment: Timentin 3.125 ug/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu0584 and Atu0585 are separated by 29 nucleotides Atu0585 and Atu8132 overlap by 1 nucleotides Atu8132 and Atu0587 are separated by 183 nucleotides Atu0587 and Atu0588 are separated by 127 nucleotides
Atu0584: Atu0584 - hypothetical protein, at 567,999 to 568,526
Atu0584
Atu0585: Atu0585 - hypothetical protein, at 568,556 to 568,924
Atu0585
Atu8132: Atu8132 - hypothetical protein, at 568,924 to 569,457
Atu8132
Atu0587: Atu0587 - teichoic acid biosynthesis protein, at 569,641 to 570,315
Atu0587
Atu0588: Atu0588 - hypothetical protein, at 570,443 to 572,206
Atu0588
Position (kb) 568
569
570 Strain fitness (log2 ratio) -1
0
1
2 at 567.981 kb on + strand at 568.096 kb on + strand, within Atu0584 at 568.107 kb on + strand, within Atu0584 at 568.114 kb on - strand, within Atu0584 at 568.130 kb on - strand, within Atu0584 at 568.138 kb on - strand, within Atu0584 at 568.151 kb on + strand, within Atu0584 at 568.152 kb on - strand, within Atu0584 at 568.164 kb on - strand, within Atu0584 at 568.195 kb on - strand, within Atu0584 at 568.227 kb on + strand, within Atu0584 at 568.286 kb on + strand, within Atu0584 at 568.294 kb on - strand, within Atu0584 at 568.310 kb on - strand, within Atu0584 at 568.310 kb on - strand, within Atu0584 at 568.313 kb on + strand, within Atu0584 at 568.366 kb on + strand, within Atu0584 at 568.384 kb on - strand, within Atu0584 at 568.406 kb on + strand, within Atu0584 at 568.592 kb on + strand at 568.667 kb on - strand, within Atu0585 at 568.762 kb on + strand, within Atu0585 at 568.762 kb on + strand, within Atu0585 at 568.814 kb on + strand, within Atu0585 at 568.895 kb on + strand at 568.898 kb on + strand at 568.976 kb on + strand at 568.980 kb on + strand, within Atu8132 at 568.986 kb on - strand, within Atu8132 at 569.060 kb on - strand, within Atu8132 at 569.142 kb on + strand, within Atu8132 at 569.142 kb on + strand, within Atu8132 at 569.150 kb on - strand, within Atu8132 at 569.186 kb on - strand, within Atu8132 at 569.186 kb on - strand, within Atu8132 at 569.254 kb on + strand, within Atu8132 at 569.268 kb on - strand, within Atu8132 at 569.626 kb on - strand at 569.695 kb on - strand at 569.701 kb on - strand at 569.739 kb on - strand, within Atu0587 at 569.748 kb on + strand, within Atu0587 at 569.773 kb on + strand, within Atu0587 at 569.782 kb on + strand, within Atu0587 at 569.817 kb on + strand, within Atu0587 at 569.820 kb on - strand, within Atu0587 at 569.825 kb on - strand, within Atu0587 at 569.865 kb on + strand, within Atu0587 at 569.958 kb on + strand, within Atu0587 at 569.966 kb on - strand, within Atu0587 at 570.027 kb on - strand, within Atu0587 at 570.101 kb on - strand, within Atu0587 at 570.110 kb on + strand, within Atu0587 at 570.147 kb on + strand, within Atu0587 at 570.187 kb on - strand, within Atu0587 at 570.198 kb on + strand, within Atu0587 at 570.206 kb on - strand, within Atu0587 at 570.265 kb on + strand at 570.348 kb on + strand at 570.398 kb on - strand at 570.445 kb on - strand at 570.446 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Timentin 3.125 ug/mL remove 567,981 + -0.1 568,096 + Atu0584 0.18 -0.7 568,107 + Atu0584 0.20 +0.3 568,114 - Atu0584 0.22 +0.1 568,130 - Atu0584 0.25 +1.5 568,138 - Atu0584 0.26 +0.6 568,151 + Atu0584 0.29 +0.7 568,152 - Atu0584 0.29 -0.2 568,164 - Atu0584 0.31 -1.1 568,195 - Atu0584 0.37 -0.4 568,227 + Atu0584 0.43 -0.6 568,286 + Atu0584 0.54 -0.2 568,294 - Atu0584 0.56 +0.7 568,310 - Atu0584 0.59 -1.7 568,310 - Atu0584 0.59 +0.7 568,313 + Atu0584 0.59 +0.1 568,366 + Atu0584 0.70 +0.0 568,384 - Atu0584 0.73 +0.0 568,406 + Atu0584 0.77 +0.1 568,592 + -0.4 568,667 - Atu0585 0.30 +0.1 568,762 + Atu0585 0.56 -0.5 568,762 + Atu0585 0.56 +1.8 568,814 + Atu0585 0.70 +0.3 568,895 + +0.2 568,898 + +0.4 568,976 + -0.1 568,980 + Atu8132 0.10 +0.5 568,986 - Atu8132 0.12 -1.5 569,060 - Atu8132 0.25 -1.7 569,142 + Atu8132 0.41 +0.0 569,142 + Atu8132 0.41 -1.0 569,150 - Atu8132 0.42 -0.1 569,186 - Atu8132 0.49 -0.4 569,186 - Atu8132 0.49 -0.2 569,254 + Atu8132 0.62 -0.4 569,268 - Atu8132 0.64 -0.8 569,626 - -0.4 569,695 - -0.4 569,701 - -1.2 569,739 - Atu0587 0.15 -0.2 569,748 + Atu0587 0.16 +1.5 569,773 + Atu0587 0.20 +0.1 569,782 + Atu0587 0.21 +0.3 569,817 + Atu0587 0.26 +1.3 569,820 - Atu0587 0.27 -0.1 569,825 - Atu0587 0.27 +1.1 569,865 + Atu0587 0.33 +0.5 569,958 + Atu0587 0.47 -0.8 569,966 - Atu0587 0.48 -0.1 570,027 - Atu0587 0.57 +1.5 570,101 - Atu0587 0.68 +0.2 570,110 + Atu0587 0.69 +0.9 570,147 + Atu0587 0.75 -0.6 570,187 - Atu0587 0.81 -0.1 570,198 + Atu0587 0.83 +1.1 570,206 - Atu0587 0.84 -0.0 570,265 + +0.9 570,348 + -0.0 570,398 - +0.6 570,445 - +2.5 570,446 + -0.1
Or see this region's nucleotide sequence