Strain Fitness in Agrobacterium fabrum C58 around Atu4698

Experiment: Timentin 3.125 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Timentin 3.125 ug/mL
1,858,322	+				+0.1
1,858,322	+				-0.2
1,858,322	+				-0.5
1,858,347	-				-0.9
1,858,458	+		Atu4697	0.10	-0.6
1,858,466	-		Atu4697	0.11	+0.1
1,858,559	+		Atu4697	0.21	+0.5
1,858,567	-		Atu4697	0.22	-0.1
1,858,567	-		Atu4697	0.22	+0.1
1,858,676	-		Atu4697	0.33	-0.1
1,858,712	+		Atu4697	0.37	-0.1
1,858,712	+		Atu4697	0.37	-0.1
1,858,740	-		Atu4697	0.40	-0.5
1,858,797	-		Atu4697	0.46	+1.9
1,858,799	+		Atu4697	0.46	+0.5
1,858,890	+		Atu4697	0.56	+0.1
1,858,900	-		Atu4697	0.57	-0.5
1,858,981	-		Atu4697	0.66	+0.3
1,859,224	-				+0.3
1,859,310	-				+0.5
1,859,327	-				-0.3
1,859,336	+				-0.5
1,859,359	-				+0.8
1,859,422	-				-0.2
1,859,437	-		Atu4698	0.10	+0.9
1,859,483	+		Atu4698	0.14	-0.1
1,859,488	+		Atu4698	0.15	-0.2
1,859,488	+		Atu4698	0.15	-0.6
1,859,496	-		Atu4698	0.15	-0.6
1,859,662	+		Atu4698	0.29	+0.6
1,859,695	+		Atu4698	0.32	-0.3
1,859,767	+		Atu4698	0.38	-0.6
1,859,827	+		Atu4698	0.43	-0.8
1,859,931	+		Atu4698	0.52	-1.7
1,859,970	+		Atu4698	0.55	-1.1
1,860,013	+		Atu4698	0.59	+0.5
1,860,016	-		Atu4698	0.59	+0.4
1,860,030	+		Atu4698	0.60	-0.2
1,860,036	+		Atu4698	0.61	+0.1
1,860,044	-		Atu4698	0.61	-1.1
1,860,105	+		Atu4698	0.66	+0.1
1,860,261	-		Atu4698	0.79	+0.1
1,860,302	+		Atu4698	0.83	-1.1
1,860,350	-		Atu4698	0.87	+0.0
1,860,369	+		Atu4698	0.89	-0.9
1,860,370	-		Atu4698	0.89	-0.6
1,860,407	-				+0.3
1,860,412	-				+0.6
1,860,456	-				-0.1
1,860,456	-				+0.5
1,860,456	-				+0.5
1,860,524	+				-0.4
1,860,542	+				+0.5
1,860,550	-				+0.2
1,860,550	-				-0.7
1,860,617	-				+0.3
1,860,711	+		Atu4699	0.14	+0.3
1,860,714	-		Atu4699	0.14	-0.7
1,860,716	+		Atu4699	0.14	+0.3
1,860,724	-		Atu4699	0.15	-0.1
1,860,798	+		Atu4699	0.20	+0.9
1,860,823	+		Atu4699	0.21	-0.6
1,860,824	-		Atu4699	0.21	+0.4
1,860,826	-		Atu4699	0.21	+0.1
1,860,836	+		Atu4699	0.22	-0.5
1,860,851	-		Atu4699	0.23	+0.7
1,860,870	+		Atu4699	0.24	+0.4
1,861,066	+		Atu4699	0.38	+0.4
1,861,153	-		Atu4699	0.43	+1.9
1,861,190	+		Atu4699	0.46	+0.9
1,861,199	+		Atu4699	0.46	-0.5
1,861,213	-		Atu4699	0.47	+0.0
1,861,256	-		Atu4699	0.50	+0.3
1,861,290	+		Atu4699	0.53	-0.1
1,861,290	+		Atu4699	0.53	-0.4
1,861,290	+		Atu4699	0.53	-0.4
1,861,291	+		Atu4699	0.53	-1.7
1,861,329	+		Atu4699	0.55	+0.4
1,861,337	-		Atu4699	0.56	-0.8
1,861,358	+		Atu4699	0.57	+0.2
1,861,385	+		Atu4699	0.59	+0.1