Strain Fitness in Agrobacterium fabrum C58 around Atu3110

Experiment: Timentin 3.125 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Timentin 3.125 ug/mL
118,765	+				-0.6
118,784	+				+1.8
118,784	+				+0.1
118,878	+		Atu3109	0.18	+0.1
118,883	+		Atu3109	0.19	+0.1
118,883	+		Atu3109	0.19	-0.0
118,886	-		Atu3109	0.19	-0.3
118,890	+		Atu3109	0.20	-0.4
118,891	-		Atu3109	0.20	+0.1
118,891	-		Atu3109	0.20	-1.0
118,989	+		Atu3109	0.29	-0.4
118,991	+		Atu3109	0.30	-0.2
119,004	-		Atu3109	0.31	+0.1
119,004	-		Atu3109	0.31	-0.2
119,009	-		Atu3109	0.31	+0.1
119,118	+		Atu3109	0.42	-0.1
119,126	-		Atu3109	0.43	-0.2
119,291	-		Atu3109	0.59	-0.3
119,366	-		Atu3109	0.66	+0.8
119,424	-		Atu3109	0.72	+1.4
119,429	-		Atu3109	0.73	+0.1
119,601	-		Atu3109	0.90	-0.1
119,673	+				+3.0
119,904	-		Atu3110	0.25	-1.4
119,937	+		Atu3110	0.30	-0.6
120,003	-		Atu3110	0.38	-1.2
120,029	+		Atu3110	0.41	+0.0
120,144	-		Atu3110	0.56	-1.2
120,154	-		Atu3110	0.57	+2.4
120,178	-		Atu3110	0.60	-0.2
120,178	-		Atu3110	0.60	-1.2
120,182	+		Atu3110	0.61	-0.9
120,189	-		Atu3110	0.62	-0.0
120,359	-		Atu3110	0.83	-1.1
120,377	+		Atu3110	0.85	-0.8
120,394	-		Atu3110	0.88	-0.6
120,506	-				+1.2
120,523	+				+0.8
120,528	+				+0.1
120,541	-				+0.4
120,655	-				-0.1
120,667	+				-0.4
120,685	+				+1.0
120,698	-				-0.8
120,737	-				-0.9
120,765	-				+0.2
120,798	+		Atu3111	0.12	+0.4
120,799	+		Atu3111	0.12	+0.4
120,807	-		Atu3111	0.13	+0.4
120,882	-		Atu3111	0.20	+0.1
120,882	-		Atu3111	0.20	-0.1
120,911	-		Atu3111	0.23	-0.4
120,965	+		Atu3111	0.28	+0.1
120,965	+		Atu3111	0.28	-0.8
120,965	+		Atu3111	0.28	+0.2
120,973	-		Atu3111	0.29	-0.6
120,973	-		Atu3111	0.29	-0.3
120,973	-		Atu3111	0.29	+0.5
120,973	-		Atu3111	0.29	-0.5
120,978	+		Atu3111	0.29	+0.1
121,023	-		Atu3111	0.33	-2.3
121,147	+		Atu3111	0.45	-0.2
121,155	-		Atu3111	0.46	+0.6
121,200	-		Atu3111	0.50	+1.4
121,363	+		Atu3111	0.65	+0.5
121,368	+		Atu3111	0.65	-0.2