Strain Fitness in Agrobacterium fabrum C58 around Atu6147

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
164,775	+		Atu6145	0.38	-0.3
164,783	-		Atu6145	0.39	+0.7
164,783	-		Atu6145	0.39	-0.6
164,788	-		Atu6145	0.40	-1.3
164,891	+		Atu6145	0.52	-1.8
164,899	-		Atu6145	0.53	-0.2
164,906	+		Atu6145	0.54	-1.8
164,932	-		Atu6145	0.57	+0.0
164,986	+		Atu6145	0.64	+0.2
164,994	-		Atu6145	0.65	+0.1
165,056	+		Atu6145	0.72	-1.3
165,062	-		Atu6145	0.73	-0.4
165,085	-		Atu6145	0.76	-0.5
165,155	+		Atu6145	0.84	+0.8
165,159	-		Atu6145	0.85	+1.5
165,163	-		Atu6145	0.85	+0.3
165,179	+		Atu6145	0.87	+1.5
165,179	+		Atu6145	0.87	+0.1
165,183	-		Atu6145	0.88	+0.5
165,187	-		Atu6145	0.88	-3.6
165,221	-				+0.9
165,242	+				+0.1
165,291	+				-0.6
165,299	-				-1.5
165,299	-				-0.0
165,322	+				+1.1
165,330	-		Atu6146	0.11	-1.3
165,332	+		Atu6146	0.11	-0.1
165,340	-		Atu6146	0.13	+0.4
165,366	+		Atu6146	0.19	-3.6
165,423	+		Atu6146	0.31	-1.0
165,429	+		Atu6146	0.32	-0.2
165,439	-		Atu6146	0.34	-2.5
165,449	-		Atu6146	0.37	-1.5
165,449	-		Atu6146	0.37	-0.4
165,534	-		Atu6146	0.55	+0.7
165,591	+		Atu6146	0.68	-0.0
165,594	-		Atu6146	0.68	+0.2
165,600	+		Atu6146	0.69	-2.7
165,613	-		Atu6146	0.72	-0.0
165,686	-		Atu6146	0.88	+2.2
165,754	-				-0.7
165,777	+				-0.4
165,836	+				-0.9
165,874	-		Atu6147	0.12	+0.3
165,975	-		Atu6147	0.22	+0.5
166,050	-		Atu6147	0.29	+0.4
166,078	-		Atu6147	0.32	+0.9
166,098	+		Atu6147	0.34	+0.5
166,098	+		Atu6147	0.34	+1.6
166,098	+		Atu6147	0.34	-2.8
166,106	-		Atu6147	0.35	+0.6
166,140	-		Atu6147	0.39	+1.3
166,142	+		Atu6147	0.39	-0.8
166,150	-		Atu6147	0.40	+1.7
166,203	+		Atu6147	0.45	+2.1
166,211	-		Atu6147	0.46	+2.8
166,250	+		Atu6147	0.50	-1.1
166,258	-		Atu6147	0.51	+0.3
166,282	+		Atu6147	0.53	+1.9
166,282	+		Atu6147	0.53	-0.4
166,315	+		Atu6147	0.56	-0.7
166,337	+		Atu6147	0.59	-1.6
166,380	-		Atu6147	0.63	-2.0
166,412	+		Atu6147	0.66	+0.9
166,532	+				-1.2
166,564	+				+0.5
166,592	-				-0.1
166,607	-				+0.9
166,613	+				-0.1
166,614	+				+4.7
166,634	+				+2.4
166,642	-				+1.8
166,657	+				-0.5
166,662	+				+0.6
166,664	-				+0.7
166,670	-				-0.5
166,670	-				+1.7
166,692	-				+0.5
166,741	-				+0.4
166,746	-		Atu6148	0.28	+0.1
166,793	+		Atu6148	0.33	-1.0
166,862	-		Atu6148	0.41	+0.3
166,871	-		Atu6148	0.42	+0.5
166,878	-		Atu6148	0.43	-0.0
166,902	+		Atu6148	0.46	+1.1
166,902	+		Atu6148	0.46	+0.8
166,910	-		Atu6148	0.47	-0.5
166,915	+		Atu6148	0.47	-0.2
167,022	+		Atu6148	0.59	-0.1
167,030	-		Atu6148	0.60	-0.2
167,030	-		Atu6148	0.60	-1.6
167,058	+		Atu6148	0.63	+0.2
167,058	+		Atu6148	0.63	+0.2
167,110	+		Atu6148	0.69	-2.1
167,128	-		Atu6148	0.71	-0.9
167,135	+		Atu6148	0.72	-1.0
167,143	-		Atu6148	0.73	-0.6
167,169	+		Atu6148	0.76	+2.1
167,179	-		Atu6148	0.77	+1.1
167,205	+		Atu6148	0.80	-0.8
167,211	-		Atu6148	0.81	-1.3
167,251	+		Atu6148	0.85	-2.8
167,254	-		Atu6148	0.85	-0.0
167,257	-		Atu6148	0.86	-0.3
167,282	-		Atu6148	0.89	+0.1
167,284	+		Atu6148	0.89	-0.5
167,284	+		Atu6148	0.89	-0.3
167,287	-		Atu6148	0.89	-0.6
167,292	-		Atu6148	0.90	-1.3
167,292	-		Atu6148	0.90	-0.3
167,296	+				-0.8
167,304	-				-1.3
167,306	+				+0.7
167,439	+				-2.7
167,471	+				+0.3
167,515	+				-2.1
167,556	+				-2.3
167,563	-				+0.5
167,631	+		Atu6149	0.26	+0.8
167,631	+		Atu6149	0.26	-0.1
167,639	-		Atu6149	0.28	-1.1
167,639	-		Atu6149	0.28	+0.7
167,659	+		Atu6149	0.34	-0.5
167,667	-		Atu6149	0.36	-1.2
167,667	-		Atu6149	0.36	-0.9
167,670	+		Atu6149	0.37	+1.3
167,674	+		Atu6149	0.38	+1.6
167,674	+		Atu6149	0.38	-0.5
167,689	-		Atu6149	0.43	+1.3
167,689	-		Atu6149	0.43	+0.0