Strain Fitness in Agrobacterium fabrum C58 around Atu6144

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
162,711	-				+0.2
162,726	-				-0.5
162,771	-				-2.3
162,851	+				-1.7
162,861	+				+1.8
162,861	+				+0.2
162,869	-				+0.4
162,921	+		Atu6143	0.15	+0.2
162,921	+		Atu6143	0.15	+0.0
162,921	+		Atu6143	0.15	+1.2
162,922	-		Atu6143	0.15	+0.5
162,946	+		Atu6143	0.18	+0.5
162,947	-		Atu6143	0.18	-1.3
162,947	-		Atu6143	0.18	+2.0
162,949	-		Atu6143	0.18	-1.1
162,953	+		Atu6143	0.18	-0.6
162,953	+		Atu6143	0.18	-0.4
162,961	-		Atu6143	0.19	-0.1
163,002	-		Atu6143	0.24	-0.1
163,007	-		Atu6143	0.25	-1.0
163,009	+		Atu6143	0.25	+0.5
163,041	-		Atu6143	0.29	-0.1
163,054	-		Atu6143	0.30	+0.6
163,054	-		Atu6143	0.30	+0.7
163,079	+		Atu6143	0.33	+2.7
163,164	+		Atu6143	0.43	-1.1
163,197	-		Atu6143	0.47	+0.3
163,219	-		Atu6143	0.49	-0.0
163,316	+		Atu6143	0.61	+1.0
163,324	+		Atu6143	0.62	-0.6
163,333	-		Atu6143	0.63	-2.5
163,353	-		Atu6143	0.65	+2.3
163,388	+		Atu6143	0.69	-1.8
163,396	-		Atu6143	0.70	-1.6
163,396	-		Atu6143	0.70	+0.5
163,458	-		Atu6143	0.77	-2.3
163,469	-		Atu6143	0.78	-1.1
163,503	+		Atu6143	0.82	-0.5
163,503	+		Atu6143	0.82	-0.3
163,508	+		Atu6143	0.83	-0.1
163,562	+		Atu6143	0.89	-0.1
163,691	-				+0.8
163,856	+		Atu6144	0.23	+1.7
163,857	-		Atu6144	0.23	+1.0
163,864	-		Atu6144	0.24	+0.3
163,876	+		Atu6144	0.26	+0.5
163,905	+		Atu6144	0.29	-0.1
163,924	-		Atu6144	0.32	-1.4
163,942	-		Atu6144	0.34	-0.3
163,952	-		Atu6144	0.35	+1.5
163,975	+		Atu6144	0.38	+0.1
163,975	+		Atu6144	0.38	-0.5
163,975	+		Atu6144	0.38	-0.2
163,975	+		Atu6144	0.38	-0.2
163,975	+		Atu6144	0.38	+1.8
163,983	-		Atu6144	0.39	-0.7
163,983	-		Atu6144	0.39	+0.6
163,983	-		Atu6144	0.39	-0.7
163,998	+		Atu6144	0.41	-0.1
164,087	+		Atu6144	0.52	+0.5
164,090	-		Atu6144	0.52	-0.5
164,095	-		Atu6144	0.53	-0.1
164,097	+		Atu6144	0.53	+1.4
164,097	+		Atu6144	0.53	+0.1
164,097	+		Atu6144	0.53	-0.5
164,105	-		Atu6144	0.54	-0.9
164,105	-		Atu6144	0.54	+0.6
164,105	-		Atu6144	0.54	-1.5
164,105	-		Atu6144	0.54	+0.5
164,180	+		Atu6144	0.64	-2.0
164,271	+		Atu6144	0.75	+2.4
164,296	+		Atu6144	0.78	-2.8
164,353	+		Atu6144	0.85	+1.7
164,361	-		Atu6144	0.86	+0.2
164,445	+				+0.1
164,447	+				-0.7
164,469	+				-1.1
164,477	-				+1.5
164,477	-				+0.2
164,550	-		Atu6145	0.11	-0.8
164,550	-		Atu6145	0.11	+0.0
164,569	+		Atu6145	0.13	+0.3
164,576	-		Atu6145	0.14	-0.5
164,596	-		Atu6145	0.16	-1.2
164,596	-		Atu6145	0.16	-1.6
164,725	+		Atu6145	0.32	-0.1
164,775	+		Atu6145	0.38	-0.3
164,783	-		Atu6145	0.39	+0.7
164,783	-		Atu6145	0.39	-0.6
164,788	-		Atu6145	0.40	-1.3
164,891	+		Atu6145	0.52	-1.8
164,899	-		Atu6145	0.53	-0.2
164,906	+		Atu6145	0.54	-1.8
164,932	-		Atu6145	0.57	+0.0
164,986	+		Atu6145	0.64	+0.3
164,994	-		Atu6145	0.65	+0.1
165,056	+		Atu6145	0.72	-1.3
165,062	-		Atu6145	0.73	-0.4
165,085	-		Atu6145	0.76	-0.5
165,155	+		Atu6145	0.84	+0.8
165,159	-		Atu6145	0.85	+1.5
165,163	-		Atu6145	0.85	+0.3
165,179	+		Atu6145	0.87	+1.5
165,179	+		Atu6145	0.87	+0.1
165,183	-		Atu6145	0.88	+0.5
165,187	-		Atu6145	0.88	-3.6
165,221	-				+0.9
165,242	+				+0.1
165,291	+				-0.6
165,299	-				-1.5
165,299	-				-0.0
165,322	+				+1.1
165,330	-		Atu6146	0.11	-1.3
165,332	+		Atu6146	0.11	-0.1
165,340	-		Atu6146	0.13	+0.4
165,366	+		Atu6146	0.19	-3.6
165,423	+		Atu6146	0.31	-1.0
165,429	+		Atu6146	0.32	-0.2
165,439	-		Atu6146	0.34	-2.5
165,449	-		Atu6146	0.37	-1.5
165,449	-		Atu6146	0.37	-0.4