Strain Fitness in Agrobacterium fabrum C58 around Atu5471

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
462,567	-		Atu5469	0.58	-2.0
462,628	-		Atu5469	0.64	-0.1
462,631	+		Atu5469	0.64	-1.3
462,681	+		Atu5469	0.69	+0.7
462,684	-		Atu5469	0.69	-0.0
462,686	-		Atu5469	0.69	-1.2
462,701	+		Atu5469	0.71	-2.0
462,718	+		Atu5469	0.72	+0.4
462,771	-		Atu5469	0.77	+0.6
462,811	+		Atu5469	0.81	+1.9
462,822	+		Atu5469	0.82	-0.1
462,837	+		Atu5469	0.83	+1.0
462,894	+		Atu5469	0.89	-0.4
462,902	+		Atu5469	0.89	+0.7
462,911	-				+3.9
462,938	+				-0.7
462,938	+				+0.6
463,142	-		Atu5470	0.53	-0.1
463,143	-		Atu5470	0.54	-1.9
463,191	-		Atu5470	0.77	+0.3
463,242	+				+1.4
463,250	-				-0.6
463,270	-				-0.2
463,330	-				+1.5
463,330	-				-1.7
463,539	+		Atu5471	0.13	-0.4
463,606	+		Atu5471	0.41	-1.1
463,629	-		Atu5471	0.51	-2.3
463,672	+		Atu5471	0.69	-0.0
463,733	-				+0.6
463,744	+				+0.1
463,754	+				-1.9
463,781	+				+2.4
463,791	+				-1.2
463,810	+				+0.3
463,870	+				+0.8
463,889	+				-0.1
463,889	+				-0.3
463,889	+				-2.5
463,889	+				+0.7
463,889	+				+0.6
463,889	+				+0.0
463,897	-				-2.1
463,897	-				+1.7
463,897	-				-0.2
463,897	-				+1.0
463,938	+				-0.4
463,977	-				+0.9
463,977	-				+2.2
463,977	-				-0.9
463,991	+				-0.3
463,995	-				-0.1
463,996	+				-0.5
464,004	-				+1.4
464,093	-				+1.9
464,093	-				-1.0