Strain Fitness in Agrobacterium fabrum C58 around Atu5070

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
68,004	-				-1.5
68,004	-				+1.1
68,006	-				-2.8
68,009	-				-0.8
68,009	-				-0.1
68,009	-				+0.3
68,009	-				-0.9
68,009	-				-1.2
68,154	-		Atu5069	0.20	+0.1
68,187	-		Atu5069	0.24	+1.2
68,224	+		Atu5069	0.28	+0.6
68,242	+		Atu5069	0.30	+1.3
68,364	-		Atu5069	0.43	-0.4
68,404	+		Atu5069	0.47	+1.1
68,539	-		Atu5069	0.61	+0.2
68,539	-		Atu5069	0.61	-0.4
68,551	-		Atu5069	0.62	-0.4
68,571	+		Atu5069	0.64	+2.7
68,645	+		Atu5069	0.72	+0.3
68,736	+		Atu5069	0.82	-0.2
68,736	+		Atu5069	0.82	-1.4
68,736	+		Atu5069	0.82	+0.5
68,736	+		Atu5069	0.82	+0.5
68,739	-		Atu5069	0.82	+0.6
68,744	-		Atu5069	0.83	-3.1
68,744	-		Atu5069	0.83	-1.7
68,744	-		Atu5069	0.83	+0.8
68,744	-		Atu5069	0.83	+0.0
68,807	+		Atu5069	0.89	-0.7
68,885	+				-0.1
68,885	+				-0.1
68,893	-				+0.2
68,950	+				-1.4
68,988	+				-0.2
69,108	+		Atu5070	0.20	-0.5
69,136	-		Atu5070	0.23	+0.1
69,220	+		Atu5070	0.33	+1.8
69,220	+		Atu5070	0.33	-0.1
69,220	+		Atu5070	0.33	+2.5
69,220	+		Atu5070	0.33	+1.9
69,228	-		Atu5070	0.33	+2.6
69,228	-		Atu5070	0.33	+0.5
69,228	-		Atu5070	0.33	-0.3
69,228	-		Atu5070	0.33	+0.2
69,238	-		Atu5070	0.35	-1.5
69,259	-		Atu5070	0.37	+0.7
69,281	+		Atu5070	0.39	-1.4
69,510	-		Atu5070	0.64	+1.6
69,546	+		Atu5070	0.68	+1.4
69,546	+		Atu5070	0.68	-0.1
69,547	-		Atu5070	0.68	+0.5
69,573	+		Atu5070	0.71	+1.4
69,574	-		Atu5070	0.71	+0.2
69,618	+		Atu5070	0.76	+0.1
69,666	+		Atu5070	0.81	+1.3
69,669	-		Atu5070	0.82	-1.0
69,673	-		Atu5070	0.82	+0.9
69,682	+		Atu5070	0.83	+1.1
69,794	+				-0.2
69,842	+				+0.6
69,855	+				+1.6
69,887	-				+0.2
69,926	+				+0.3
69,926	+				-0.5
69,926	+				+0.7
69,929	-				+0.6
69,941	+				+0.8
69,975	+				-0.6
69,983	-				-0.2
69,983	-				-1.0
69,983	-				+0.0
69,985	+				-0.4
70,003	+				-0.5
70,008	+				+1.1
70,011	-				-1.0
70,011	-				-0.4
70,011	-				+0.2
70,011	-				-1.7
70,016	-				-0.0
70,021	-				-0.8
70,096	-				+2.1
70,103	+				-1.2
70,186	+		Atu5071	0.10	+0.5
70,186	+		Atu5071	0.10	-0.0
70,194	-		Atu5071	0.11	-1.8
70,194	-		Atu5071	0.11	+0.1
70,194	-		Atu5071	0.11	+0.8
70,201	-		Atu5071	0.11	+0.3
70,236	-		Atu5071	0.13	-0.2
70,367	+		Atu5071	0.22	-0.6
70,374	-		Atu5071	0.23	+0.3
70,374	-		Atu5071	0.23	-0.9
70,384	-		Atu5071	0.23	-1.8
70,391	-		Atu5071	0.24	-0.2
70,399	-		Atu5071	0.24	-1.8
70,414	-		Atu5071	0.25	-0.0
70,537	+		Atu5071	0.33	-2.1
70,551	-		Atu5071	0.34	+0.8
70,572	-		Atu5071	0.36	+1.4
70,602	+		Atu5071	0.38	-0.0
70,603	+		Atu5071	0.38	+0.8
70,704	+		Atu5071	0.44	-0.6
70,712	-		Atu5071	0.45	+1.6
70,712	-		Atu5071	0.45	+1.8
70,712	-		Atu5071	0.45	-2.2
70,737	-		Atu5071	0.46	-0.7
70,836	+		Atu5071	0.53	-0.8