Strain Fitness in Agrobacterium fabrum C58 around Atu4775

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
1,942,086	-		Atu4773	0.31	+3.2
1,942,316	-				+2.6
1,942,389	-				+0.2
1,942,548	-		Atu4774	0.21	+1.2
1,942,583	+		Atu4774	0.27	-1.2
1,942,599	+		Atu4774	0.29	-0.4
1,942,607	-		Atu4774	0.30	-1.9
1,942,647	-		Atu4774	0.36	+0.9
1,942,659	+		Atu4774	0.38	-2.4
1,942,667	-		Atu4774	0.39	-0.8
1,942,705	+		Atu4774	0.45	-1.9
1,942,705	+		Atu4774	0.45	-0.8
1,942,705	+		Atu4774	0.45	-1.4
1,942,713	-		Atu4774	0.46	+0.7
1,942,715	+		Atu4774	0.47	-1.0
1,942,768	+		Atu4774	0.55	+0.2
1,942,773	+		Atu4774	0.56	-1.8
1,942,897	+		Atu4774	0.74	+2.0
1,942,897	+		Atu4774	0.74	-0.7
1,942,941	-		Atu4774	0.81	-1.0
1,942,941	-		Atu4774	0.81	-0.5
1,943,055	+				-0.9
1,943,055	+				+1.1
1,943,055	+				+0.9
1,943,063	-				-0.0
1,943,064	+				-0.7
1,943,240	-		Atu4775	0.12	+0.1
1,943,240	-		Atu4775	0.12	+1.6
1,943,240	-		Atu4775	0.12	+1.6
1,943,264	+		Atu4775	0.13	+0.6
1,943,272	-		Atu4775	0.14	+1.0
1,943,366	+		Atu4775	0.20	-2.9
1,943,369	-		Atu4775	0.20	+0.3
1,943,373	+		Atu4775	0.20	+0.6
1,943,709	-		Atu4775	0.41	+0.1
1,943,815	-		Atu4775	0.48	+0.4
1,943,884	+		Atu4775	0.52	-1.9
1,943,884	+		Atu4775	0.52	-0.4
1,943,915	+		Atu4775	0.54	+2.8
1,943,956	-		Atu4775	0.57	+0.3
1,943,958	+		Atu4775	0.57	+0.4
1,943,963	+		Atu4775	0.57	-2.7
1,944,089	+		Atu4775	0.65	-1.4
1,944,102	+		Atu4775	0.66	+1.6
1,944,159	+		Atu4775	0.70	+2.3
1,944,159	+		Atu4775	0.70	-1.6
1,944,161	+		Atu4775	0.70	+0.8
1,944,318	-		Atu4775	0.80	+1.0
1,944,442	+		Atu4775	0.88	-0.5
1,944,453	+		Atu4775	0.88	-2.1
1,944,489	-				-1.2
1,944,494	-				+1.6
1,944,494	-				-0.7
1,944,531	+				+0.4
1,944,583	-				-0.6
1,944,617	-				+2.1
1,944,694	+				-2.6
1,944,694	+				+2.2
1,944,704	-				-1.2
1,944,735	-				+1.2
1,944,785	+				-0.9
1,944,796	-				-3.0
1,944,912	+				-2.4
1,944,912	+				-0.7
1,944,932	+				+0.7
1,944,943	-				+0.6
1,944,969	+				-0.5
1,945,021	-				+0.1
1,945,076	-				-0.4
1,945,117	-				+0.2
1,945,222	-		Atu4776	0.14	+0.1
1,945,256	-		Atu4776	0.16	-1.5
1,945,256	-		Atu4776	0.16	-0.2
1,945,348	-		Atu4776	0.20	-0.2