Strain Fitness in Agrobacterium fabrum C58 around Atu4701

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
1,862,011	+				-0.3
1,862,151	-		Atu4700	0.15	-0.3
1,862,165	-		Atu4700	0.17	+0.5
1,862,259	+		Atu4700	0.27	-0.1
1,862,296	+		Atu4700	0.30	+0.5
1,862,320	+		Atu4700	0.33	-1.1
1,862,507	+		Atu4700	0.52	-0.1
1,862,515	-		Atu4700	0.53	-0.1
1,862,560	-		Atu4700	0.57	+1.0
1,862,581	-		Atu4700	0.60	-2.7
1,862,586	-		Atu4700	0.60	-0.4
1,862,586	-		Atu4700	0.60	+0.1
1,862,663	+		Atu4700	0.68	+1.0
1,862,683	+		Atu4700	0.70	+0.6
1,862,772	+		Atu4700	0.79	+0.8
1,862,780	-		Atu4700	0.80	+0.5
1,862,793	+		Atu4700	0.81	+0.5
1,862,801	-		Atu4700	0.82	-1.0
1,862,801	-		Atu4700	0.82	+0.2
1,862,850	-		Atu4700	0.87	-1.8
1,862,942	-				+0.4
1,862,967	+				-0.9
1,862,988	+				-0.2
1,862,988	+				-0.0
1,862,996	-				-0.7
1,862,996	-				-0.4
1,862,996	-				+0.3
1,863,049	-				+1.9
1,863,255	+		Atu4701	0.28	+0.9
1,863,263	-		Atu4701	0.29	+0.4
1,863,291	+		Atu4701	0.31	-1.7
1,863,292	+		Atu4701	0.31	-0.4
1,863,375	+		Atu4701	0.39	+2.4
1,863,480	-		Atu4701	0.50	+0.6
1,863,571	+		Atu4701	0.59	-2.2
1,863,573	+		Atu4701	0.59	+0.6
1,863,614	+		Atu4701	0.63	+1.0
1,863,614	+		Atu4701	0.63	+1.6
1,863,627	-		Atu4701	0.64	+0.9
1,863,655	+		Atu4701	0.67	+2.5
1,863,675	+		Atu4701	0.69	-1.5
1,863,710	-		Atu4701	0.72	-1.4
1,863,715	-		Atu4701	0.73	+0.6
1,863,739	+		Atu4701	0.75	+0.4
1,863,745	+		Atu4701	0.76	-1.2
1,863,747	-		Atu4701	0.76	+0.6
1,863,747	-		Atu4701	0.76	+2.6
1,863,817	+		Atu4701	0.83	-0.1
1,863,938	+				-0.9
1,864,000	+				-0.3
1,864,000	+				-2.0
1,864,005	+				-0.8
1,864,030	-				+5.0
1,864,177	+		Atu4702	0.26	-0.8
1,864,210	+		Atu4702	0.31	-1.6
1,864,231	-		Atu4702	0.34	+1.5
1,864,252	-		Atu4702	0.37	-0.1
1,864,343	-		Atu4702	0.50	-0.5
1,864,392	-		Atu4702	0.58	-0.5
1,864,397	-		Atu4702	0.58	+0.3
1,864,425	-		Atu4702	0.62	-0.1
1,864,425	-		Atu4702	0.62	-1.2
1,864,673	-				-1.0
1,864,688	+				-0.9
1,864,698	-				+0.1
1,864,699	+				-0.6
1,864,699	+				-1.7
1,864,699	+				+1.0
1,864,699	+				+2.4
1,864,699	+				-1.8
1,864,699	+				-0.6
1,864,699	+				-0.4
1,864,699	+				+0.4
1,864,699	+				-0.2
1,864,699	+				+0.3
1,864,699	+				-0.5
1,864,699	+				-0.7
1,864,699	+				-1.0
1,864,699	+				-0.9
1,864,699	+				-0.1
1,864,699	+				+0.7
1,864,707	-				+1.1
1,864,707	-				+1.1
1,864,707	-				+3.0
1,864,707	-				-0.3
1,864,707	-				-0.0
1,864,707	-				-0.5
1,864,707	-				-0.2
1,864,707	-				+0.4
1,864,707	-				+0.5
1,864,707	-				-0.1
1,864,707	-				-3.6
1,864,836	+				-0.9
1,864,844	-				-1.2
1,864,903	+		Atu4703	0.15	-0.5
1,864,911	-		Atu4703	0.16	-1.3
1,864,911	-		Atu4703	0.16	-0.5
1,864,911	-		Atu4703	0.16	-1.0
1,864,914	+		Atu4703	0.17	-1.1
1,864,914	+		Atu4703	0.17	+0.2
1,864,916	+		Atu4703	0.17	-0.9
1,864,922	-		Atu4703	0.18	+0.6
1,864,922	-		Atu4703	0.18	+0.6