Strain Fitness in Agrobacterium fabrum C58 around Atu4654

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
1,807,131	+				-1.5
1,807,139	-				-1.4
1,807,139	-				+0.1
1,807,194	-				+1.1
1,807,224	+		Atu4653	0.12	-0.6
1,807,293	+		Atu4653	0.19	-0.7
1,807,293	+		Atu4653	0.19	+0.6
1,807,293	+		Atu4653	0.19	+1.1
1,807,293	+		Atu4653	0.19	-1.9
1,807,301	-		Atu4653	0.20	+0.1
1,807,359	+		Atu4653	0.26	-0.5
1,807,398	-		Atu4653	0.30	+0.7
1,807,518	+		Atu4653	0.43	-1.6
1,807,539	-		Atu4653	0.45	+1.6
1,807,552	-		Atu4653	0.47	+0.6
1,807,592	-		Atu4653	0.51	-1.7
1,807,692	+		Atu4653	0.62	+0.4
1,807,706	-		Atu4653	0.63	-1.0
1,807,733	+		Atu4653	0.66	+0.5
1,807,738	+		Atu4653	0.66	-0.3
1,807,738	+		Atu4653	0.66	+0.5
1,807,738	+		Atu4653	0.66	-1.3
1,807,738	+		Atu4653	0.66	-1.9
1,807,746	-		Atu4653	0.67	+0.1
1,807,780	-		Atu4653	0.71	-0.9
1,808,033	+				+0.5
1,808,084	+				+1.6
1,808,152	-				-0.2
1,808,152	-				+0.8
1,808,154	+				+0.1
1,808,154	+				+0.5
1,808,164	+				-0.2
1,808,164	+				-0.7
1,808,199	+		Atu4654	0.10	-1.5
1,808,201	+		Atu4654	0.10	-0.4
1,808,201	+		Atu4654	0.10	-1.0
1,808,201	+		Atu4654	0.10	-0.3
1,808,201	+		Atu4654	0.10	-0.0
1,808,227	+		Atu4654	0.12	-2.0
1,808,227	+		Atu4654	0.12	-1.5
1,808,227	+		Atu4654	0.12	-1.4
1,808,234	-		Atu4654	0.13	-0.7
1,808,235	-		Atu4654	0.13	-1.0
1,808,235	-		Atu4654	0.13	+0.5
1,808,368	-		Atu4654	0.23	-1.3
1,808,423	+		Atu4654	0.28	-0.4
1,808,501	+		Atu4654	0.34	+0.5
1,808,501	-		Atu4654	0.34	+1.6
1,808,501	-		Atu4654	0.34	-2.4
1,808,544	-		Atu4654	0.37	-0.4
1,808,750	+		Atu4654	0.54	-0.4
1,808,850	+		Atu4654	0.62	+0.8
1,809,008	+		Atu4654	0.74	-1.7
1,809,008	+		Atu4654	0.74	+0.0
1,809,008	+		Atu4654	0.74	-1.7
1,809,064	+		Atu4654	0.78	-0.4
1,809,078	+		Atu4654	0.80	-0.0
1,809,086	-		Atu4654	0.80	+0.4
1,809,107	-		Atu4654	0.82	+0.4
1,809,175	-		Atu4654	0.87	-0.7
1,809,200	+		Atu4654	0.89	+0.8
1,809,200	+		Atu4654	0.89	+0.7
1,809,214	-				+0.2
1,809,304	+				+0.1
1,809,317	-				-1.2
1,809,317	-				+0.4
1,809,446	-				+0.6
1,809,447	+				-0.9
1,809,450	-				+0.9
1,809,589	+				-1.2
1,809,598	+				-1.9
1,809,599	-				-0.5
1,809,672	-				+2.3
1,809,732	+		Atu4655	0.12	-0.8
1,809,733	+		Atu4655	0.12	-2.0
1,809,760	+		Atu4655	0.14	+0.4
1,809,762	+		Atu4655	0.15	+1.6
1,809,834	-		Atu4655	0.20	-1.7
1,809,937	-		Atu4655	0.29	-0.8
1,809,972	+		Atu4655	0.32	-0.5
1,809,973	+		Atu4655	0.32	-2.6
1,809,973	+		Atu4655	0.32	-0.8
1,810,037	-		Atu4655	0.37	+0.4
1,810,143	+		Atu4655	0.46	-0.1
1,810,211	+		Atu4655	0.51	-0.8
1,810,219	-		Atu4655	0.52	-1.4
1,810,276	+		Atu4655	0.56	+0.4