Strain Fitness in Agrobacterium fabrum C58 around Atu4631

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
1,779,772	+		Atu4629	0.39	+1.2
1,779,843	-		Atu4629	0.47	+0.8
1,779,869	+		Atu4629	0.50	-0.3
1,779,928	-		Atu4629	0.57	+1.6
1,779,933	-		Atu4629	0.57	-1.8
1,779,933	-		Atu4629	0.57	-0.1
1,779,951	-		Atu4629	0.59	-2.6
1,779,977	-		Atu4629	0.62	+0.8
1,779,986	+		Atu4629	0.63	-1.7
1,780,140	-		Atu4629	0.81	+2.8
1,780,167	+		Atu4629	0.84	-2.2
1,780,209	-		Atu4629	0.88	-0.4
1,780,209	-		Atu4629	0.88	-0.4
1,780,211	+		Atu4629	0.88	+1.8
1,780,302	+				+1.0
1,780,311	-				-1.0
1,780,348	-				-0.4
1,780,439	+		Atu4630	0.29	+1.6
1,780,447	-		Atu4630	0.32	-2.2
1,780,598	+		Atu4630	0.84	+1.3
1,780,606	-		Atu4630	0.87	+0.6
1,780,623	+				+0.4
1,780,623	+				-1.2
1,780,623	+				-0.7
1,780,623	+				-0.7
1,780,631	-				-0.6
1,780,631	-				+1.0
1,780,753	+		Atu4631	0.14	-2.1
1,780,828	+		Atu4631	0.23	-2.4
1,780,828	+		Atu4631	0.23	-2.2
1,780,828	+		Atu4631	0.23	-1.2
1,780,831	-		Atu4631	0.23	-0.8
1,780,836	-		Atu4631	0.24	-0.9
1,780,836	-		Atu4631	0.24	-1.8
1,780,965	-		Atu4631	0.39	-0.9
1,781,051	+		Atu4631	0.49	-0.4
1,781,096	+		Atu4631	0.55	-1.8
1,781,104	-		Atu4631	0.56	+0.2
1,781,299	+		Atu4631	0.79	-0.7
1,781,370	-		Atu4631	0.88	-0.7
1,781,380	+		Atu4631	0.89	-0.1
1,781,390	-				-0.4
1,781,527	+				+0.6
1,781,604	+				-0.2
1,781,688	-				-1.0
1,781,704	-				-0.0
1,781,902	+		Atu4632	0.18	+2.0
1,781,909	-		Atu4632	0.19	+1.2
1,782,020	+		Atu4632	0.23	-1.5
1,782,121	+		Atu4632	0.28	+0.3
1,782,121	+		Atu4632	0.28	-0.2
1,782,121	+		Atu4632	0.28	+1.2
1,782,121	+		Atu4632	0.28	+0.1
1,782,129	-		Atu4632	0.28	+0.3
1,782,129	-		Atu4632	0.28	+1.1
1,782,129	-		Atu4632	0.28	-0.1
1,782,129	-		Atu4632	0.28	-0.3
1,782,161	-		Atu4632	0.30	+1.5
1,782,290	+		Atu4632	0.35	-0.1
1,782,298	-		Atu4632	0.35	-2.4
1,782,359	+		Atu4632	0.38	-2.3
1,782,428	+		Atu4632	0.41	-0.6