Strain Fitness in Agrobacterium fabrum C58 around Atu4570

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
1,717,620	-				+0.3
1,717,622	+				-0.7
1,717,859	-		Atu4569	0.30	-3.0
1,717,983	-		Atu4569	0.42	+1.1
1,718,031	+		Atu4569	0.46	+0.9
1,718,039	-		Atu4569	0.47	+1.9
1,718,042	+		Atu4569	0.47	+0.5
1,718,060	-		Atu4569	0.49	+1.5
1,718,062	-		Atu4569	0.49	+1.7
1,718,130	+		Atu4569	0.56	+0.7
1,718,208	+		Atu4569	0.63	+0.2
1,718,256	+		Atu4569	0.68	-0.4
1,718,389	+		Atu4569	0.81	-1.7
1,718,394	+		Atu4569	0.81	-0.4
1,718,397	-		Atu4569	0.81	+1.2
1,718,397	-		Atu4569	0.81	-1.5
1,718,435	-		Atu4569	0.85	+0.3
1,718,442	+		Atu4569	0.86	-0.8
1,718,450	-		Atu4569	0.87	-1.5
1,718,450	-		Atu4569	0.87	+0.5
1,718,450	-		Atu4569	0.87	+0.6
1,718,450	-		Atu4569	0.87	+0.1
1,718,522	+				+0.6
1,718,548	+				+1.2
1,718,565	-				+0.2
1,718,681	+		Atu4570	0.11	-1.7
1,718,709	-		Atu4570	0.14	+1.1
1,718,734	+		Atu4570	0.17	+0.4
1,718,819	-		Atu4570	0.27	-2.0
1,718,885	-		Atu4570	0.35	-0.9
1,718,903	+		Atu4570	0.37	+0.3
1,718,903	+		Atu4570	0.37	+1.7
1,718,995	+		Atu4570	0.47	-0.2
1,718,995	+		Atu4570	0.47	-1.2
1,719,005	+		Atu4570	0.49	+1.1
1,719,013	-		Atu4570	0.50	+0.1
1,719,071	-		Atu4570	0.56	-1.3
1,719,078	+		Atu4570	0.57	+0.6
1,719,182	+		Atu4570	0.69	+0.7
1,719,235	+		Atu4570	0.76	+1.8
1,719,242	+		Atu4570	0.76	+0.5
1,719,325	+		Atu4570	0.86	-0.9
1,719,342	+		Atu4570	0.88	+1.3
1,719,343	-		Atu4570	0.88	+2.0
1,719,343	-		Atu4570	0.88	+2.4
1,719,343	-		Atu4570	0.88	+1.5
1,719,422	-				-0.8
1,719,428	-				+0.2
1,719,437	+				-0.5
1,719,625	+		Atu4571	0.21	+0.7
1,719,625	+		Atu4571	0.21	-0.3
1,719,633	-		Atu4571	0.22	-0.3
1,719,668	+		Atu4571	0.26	-1.3
1,719,710	+		Atu4571	0.31	-0.1
1,719,710	+		Atu4571	0.31	+1.9
1,719,717	+		Atu4571	0.32	+1.2
1,719,737	+		Atu4571	0.34	-0.5
1,719,908	-		Atu4571	0.54	-2.2
1,719,975	+		Atu4571	0.62	+0.2
1,719,979	+		Atu4571	0.62	+0.4
1,719,983	-		Atu4571	0.62	+1.7
1,719,987	-		Atu4571	0.63	-0.4
1,720,013	+		Atu4571	0.66	-0.6
1,720,220	-				+0.7
1,720,220	-				-2.1
1,720,282	-				-0.9
1,720,282	-				+0.7
1,720,390	-				-0.2
1,720,434	+				-1.0