Strain Fitness in Agrobacterium fabrum C58 around Atu4522

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
1,667,516	-				-1.1
1,667,525	+				-0.8
1,667,597	+				+0.4
1,667,644	-		Atu4521	0.13	-1.4
1,667,661	-		Atu4521	0.15	+0.1
1,667,687	+		Atu4521	0.18	+0.4
1,667,717	-		Atu4521	0.22	+1.5
1,667,818	+		Atu4521	0.34	-2.2
1,667,820	+		Atu4521	0.35	+0.1
1,667,826	-		Atu4521	0.35	+2.1
1,667,828	+		Atu4521	0.36	-0.7
1,667,830	+		Atu4521	0.36	+1.3
1,667,876	+		Atu4521	0.41	+0.2
1,667,876	+		Atu4521	0.41	+0.0
1,667,884	-		Atu4521	0.42	+0.1
1,667,940	-		Atu4521	0.49	+1.6
1,667,942	-		Atu4521	0.49	-1.4
1,668,053	-		Atu4521	0.63	-1.5
1,668,215	-		Atu4521	0.82	-1.2
1,668,239	+		Atu4521	0.85	+0.1
1,668,263	-		Atu4521	0.88	-1.1
1,668,355	+				-0.4
1,668,363	-				-1.0
1,668,368	-				-0.7
1,668,375	-				-0.4
1,668,436	+				+2.4
1,668,463	+				+1.0
1,668,535	+				-1.8
1,668,535	+				-2.4
1,668,616	+				-1.7
1,668,630	-				+0.4
1,668,856	-		Atu4522	0.22	-2.6
1,668,863	+		Atu4522	0.22	-0.7
1,669,090	-		Atu4522	0.35	-0.9
1,669,143	-		Atu4522	0.38	+1.0
1,669,143	-		Atu4522	0.38	+0.0
1,669,143	-		Atu4522	0.38	-2.6
1,669,143	-		Atu4522	0.38	-1.6
1,669,205	+		Atu4522	0.42	-2.3
1,669,336	-		Atu4522	0.49	-2.6
1,669,387	+		Atu4522	0.52	+0.2
1,669,601	-		Atu4522	0.65	-0.7
1,669,625	-		Atu4522	0.66	-1.0
1,669,649	-		Atu4522	0.67	+0.0
1,669,748	+		Atu4522	0.73	-0.4
1,669,749	-		Atu4522	0.73	-1.8
1,669,830	-		Atu4522	0.78	-1.0
1,669,848	-		Atu4522	0.79	-0.7
1,669,972	+		Atu4522	0.86	-1.9
1,669,972	+		Atu4522	0.86	-0.4
1,669,972	+		Atu4522	0.86	+0.0
1,669,980	-		Atu4522	0.87	-1.9
1,669,980	-		Atu4522	0.87	-1.9
1,669,980	-		Atu4522	0.87	+0.3
1,670,015	+		Atu4522	0.89	-2.4
1,670,039	+		Atu4522	0.90	-1.3
1,670,039	+		Atu4522	0.90	-2.6
1,670,047	-				-1.0
1,670,117	+				-1.3
1,670,167	+				-1.0
1,670,242	+				+1.3
1,670,242	+				+1.3
1,670,250	-				-0.4
1,670,316	-		Atu4523	0.11	-2.8
1,670,352	-		Atu4523	0.16	+1.3
1,670,387	+		Atu4523	0.20	-0.2
1,670,392	+		Atu4523	0.20	+1.6
1,670,450	+		Atu4523	0.27	+0.7
1,670,476	+		Atu4523	0.30	+0.8
1,670,583	-		Atu4523	0.43	-0.5
1,670,645	-		Atu4523	0.50	-1.6
1,670,679	-		Atu4523	0.54	+0.8
1,670,883	-		Atu4523	0.78	-1.3
1,670,937	+		Atu4523	0.85	+1.1
1,670,941	+		Atu4523	0.85	+0.0
1,670,960	+		Atu4523	0.87	+0.4
1,670,960	-		Atu4523	0.87	+1.5
1,670,997	+				-1.2