Strain Fitness in Agrobacterium fabrum C58 around Atu4411

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
1,545,108	+		Atu4409	0.61	-0.9
1,545,131	+		Atu4409	0.66	-0.0
1,545,131	+		Atu4409	0.66	-2.4
1,545,562	+		Atu4410	0.38	+0.9
1,545,628	-		Atu4410	0.48	-0.2
1,545,651	-		Atu4410	0.51	+1.3
1,545,682	+		Atu4410	0.55	+0.4
1,545,690	-		Atu4410	0.56	-0.5
1,545,866	+		Atu4410	0.81	-0.8
1,545,881	+		Atu4410	0.84	-2.2
1,545,951	+				+0.7
1,545,989	+				-0.4
1,546,002	-				+1.0
1,546,146	+		Atu4411	0.12	+0.7
1,546,367	+		Atu4411	0.38	-0.7
1,546,397	-		Atu4411	0.41	-1.0
1,546,410	+		Atu4411	0.43	-0.9
1,546,480	+		Atu4411	0.51	-0.2
1,546,493	-		Atu4411	0.53	-1.1
1,546,507	+		Atu4411	0.54	-1.7
1,546,599	+		Atu4411	0.65	-1.6
1,546,816	-				-1.3
1,546,880	+				-1.3
1,546,881	-				-0.3
1,546,985	-				+0.6
1,547,007	-				+0.3
1,547,007	-				-0.3
1,547,146	+				-2.5
1,547,218	-				-0.8
1,547,276	+				+1.0
1,547,471	+				-0.1
1,547,568	-				-0.4
1,547,568	-				+2.7
1,547,598	-				+2.1
1,547,684	+				+0.8
1,547,761	-				+0.8
1,547,761	-				-1.7
1,547,761	-				-1.6
1,547,840	+				+1.3
1,547,871	-		Atu4412	0.10	-0.5