Strain Fitness in Agrobacterium fabrum C58 around Atu4331

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
1,458,374	+				+0.5
1,458,407	+				-0.0
1,458,516	-		Atu4330	0.18	+1.1
1,458,729	+		Atu4330	0.45	+0.1
1,458,807	-		Atu4330	0.54	+0.7
1,458,820	+		Atu4330	0.56	+0.3
1,458,866	+		Atu4330	0.62	-1.7
1,458,960	+		Atu4330	0.73	-1.5
1,458,981	-		Atu4330	0.76	+0.9
1,459,038	+		Atu4330	0.83	-0.3
1,459,046	-		Atu4330	0.84	+0.6
1,459,048	-		Atu4330	0.84	-0.5
1,459,056	-		Atu4330	0.85	+0.1
1,459,066	-		Atu4330	0.86	-2.9
1,459,066	-		Atu4330	0.86	-2.1
1,459,231	+				+0.5
1,459,234	-				+0.6
1,459,240	+				-1.3
1,459,336	-				+0.3
1,459,354	-				+1.9
1,459,380	+				+0.1
1,459,428	+		Atu4331	0.12	-1.1
1,459,428	+		Atu4331	0.12	+1.2
1,459,428	+		Atu4331	0.12	-2.1
1,459,433	+		Atu4331	0.12	-0.8
1,459,436	-		Atu4331	0.13	+0.0
1,459,638	-		Atu4331	0.27	-1.4
1,459,653	-		Atu4331	0.28	-1.2
1,459,682	-		Atu4331	0.30	-0.9
1,459,687	+		Atu4331	0.30	-0.8
1,459,715	+		Atu4331	0.32	+0.4
1,459,848	-		Atu4331	0.42	+2.9
1,459,902	-		Atu4331	0.45	-0.1
1,459,925	+		Atu4331	0.47	+0.1
1,459,993	-		Atu4331	0.52	-0.2
1,460,027	-		Atu4331	0.54	-0.9
1,460,089	-		Atu4331	0.59	-1.9
1,460,270	+		Atu4331	0.71	-1.2
1,460,299	-		Atu4331	0.74	-1.0
1,460,313	+		Atu4331	0.75	+1.6
1,460,342	+		Atu4331	0.77	-0.9
1,460,634	+				-1.4
1,460,742	+				-1.0
1,460,754	+				-1.5
1,460,767	-				+0.6
1,460,777	-				+2.4
1,460,777	-				+1.2
1,460,804	-				-0.5
1,460,954	-				-1.6
1,461,098	+				-0.9
1,461,117	+		Atu4332	0.10	-0.2
1,461,382	+		Atu4332	0.18	-0.7
1,461,382	+		Atu4332	0.18	-0.7
1,461,382	+		Atu4332	0.18	-0.1
1,461,407	+		Atu4332	0.19	-0.3
1,461,452	-		Atu4332	0.20	+1.5