Strain Fitness in Agrobacterium fabrum C58 around Atu4313

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
1,439,678	+		Atu4312	0.67	+2.8
1,439,686	-		Atu4312	0.68	-2.1
1,439,726	-		Atu4312	0.69	+1.4
1,439,755	+		Atu4312	0.70	-0.1
1,439,826	-		Atu4312	0.72	+0.0
1,439,865	+		Atu4312	0.74	+0.3
1,439,883	+		Atu4312	0.74	+0.3
1,439,885	-		Atu4312	0.74	+0.2
1,439,885	-		Atu4312	0.74	+0.9
1,439,950	+		Atu4312	0.77	+1.6
1,439,950	+		Atu4312	0.77	-0.5
1,439,969	+		Atu4312	0.77	+0.1
1,440,070	+		Atu4312	0.81	+0.5
1,440,093	-		Atu4312	0.81	-0.4
1,440,102	-		Atu4312	0.82	+0.3
1,440,187	+		Atu4312	0.84	+0.7
1,440,206	+		Atu4312	0.85	-1.5
1,440,229	+		Atu4312	0.86	-0.6
1,440,236	-		Atu4312	0.86	+0.5
1,440,271	+		Atu4312	0.87	+1.4
1,440,291	-		Atu4312	0.88	-0.7
1,440,291	-		Atu4312	0.88	+0.3
1,440,291	-		Atu4312	0.88	-1.2
1,440,536	-				+0.2
1,440,560	-				+0.1
1,440,716	-		Atu4313	0.10	-0.8
1,440,783	+		Atu4313	0.22	+0.5
1,440,807	-		Atu4313	0.27	-0.4
1,440,978	+		Atu4313	0.57	+1.0
1,441,001	-		Atu4313	0.61	+1.2
1,441,045	+		Atu4313	0.69	+0.8
1,441,053	-		Atu4313	0.70	-0.5
1,441,159	-		Atu4313	0.89	+0.4
1,441,384	+		Atu4314	0.12	-1.9
1,441,392	-		Atu4314	0.12	-0.4
1,441,415	-		Atu4314	0.14	+0.1
1,441,416	-		Atu4314	0.14	-1.4
1,441,463	-		Atu4314	0.18	-0.8
1,441,544	-		Atu4314	0.24	-1.5
1,441,612	+		Atu4314	0.30	+0.1
1,441,631	-		Atu4314	0.31	+0.9
1,441,652	+		Atu4314	0.33	+1.2
1,441,676	-		Atu4314	0.35	+0.2
1,441,759	+		Atu4314	0.41	-0.4
1,441,897	+		Atu4314	0.52	-1.8
1,441,910	+		Atu4314	0.53	-0.7
1,441,927	+		Atu4314	0.54	+0.3
1,441,949	+		Atu4314	0.56	-0.2
1,441,962	-		Atu4314	0.57	-0.5
1,441,962	-		Atu4314	0.57	-0.0
1,441,962	-		Atu4314	0.57	+2.3
1,442,101	-		Atu4314	0.68	+0.5
1,442,104	+		Atu4314	0.68	+1.2
1,442,127	+		Atu4314	0.70	-0.4
1,442,180	+		Atu4314	0.74	-0.3
1,442,188	-		Atu4314	0.75	-0.5
1,442,188	-		Atu4314	0.75	+2.9