Strain Fitness in Agrobacterium fabrum C58 around Atu4139

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
1,257,617	+		Atu4138	0.20	+0.5
1,257,656	+		Atu4138	0.24	-1.7
1,257,805	+		Atu4138	0.36	-1.3
1,257,832	+		Atu4138	0.38	-0.1
1,257,907	+		Atu4138	0.44	-0.5
1,257,907	+		Atu4138	0.44	+0.5
1,257,915	-		Atu4138	0.45	-0.1
1,257,923	+		Atu4138	0.45	-3.0
1,258,004	+		Atu4138	0.52	-0.1
1,258,004	+		Atu4138	0.52	+1.3
1,258,014	+		Atu4138	0.53	+0.7
1,258,022	-		Atu4138	0.53	-0.1
1,258,055	-		Atu4138	0.56	-0.5
1,258,065	-		Atu4138	0.57	+0.9
1,258,272	+		Atu4138	0.74	-1.8
1,258,334	+		Atu4138	0.79	-0.3
1,258,372	+		Atu4138	0.82	-1.7
1,258,380	-		Atu4138	0.83	-0.5
1,258,418	+		Atu4138	0.86	-0.9
1,258,426	-		Atu4138	0.86	+2.5
1,258,478	+				-0.1
1,258,589	+				-2.0
1,258,609	-				-0.1
1,258,611	+				+0.0
1,258,619	-				-1.6
1,258,628	+				-0.1
1,258,636	+				+0.5
1,258,642	+				+0.2
1,258,673	+		Atu4139	0.15	-0.3
1,258,733	+		Atu4139	0.29	-1.7
1,258,829	+		Atu4139	0.53	-1.9
1,258,951	-		Atu4139	0.82	-1.1
1,258,999	+				-2.2
1,259,275	-		Atu4140	0.28	-0.5
1,259,369	+		Atu4140	0.39	+0.5
1,259,395	+		Atu4140	0.42	-0.2
1,259,440	+		Atu4140	0.48	+0.2
1,259,543	+		Atu4140	0.59	-1.7
1,259,599	+		Atu4140	0.66	+0.1
1,259,603	+		Atu4140	0.66	+1.6
1,259,615	+		Atu4140	0.68	-1.4
1,259,721	+		Atu4140	0.80	-0.3
1,259,721	+		Atu4140	0.80	+1.2
1,259,756	-		Atu4140	0.84	-1.5
1,259,761	-		Atu4140	0.85	-0.1
1,259,823	-				+0.9
1,259,833	+				-2.9
1,259,877	+				+0.2
1,259,879	+				+0.4
1,259,957	+				+0.7
1,259,986	+				+0.9