Strain Fitness in Agrobacterium fabrum C58 around Atu4066

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
1,181,138	+		Atu4063	0.65	-1.2
1,181,146	-		Atu4063	0.66	+1.5
1,181,179	+		Atu4063	0.70	-0.4
1,181,187	-		Atu4063	0.71	-0.6
1,181,207	-		Atu4063	0.73	-0.4
1,181,243	-		Atu4063	0.77	+0.9
1,181,277	-		Atu4063	0.81	-0.7
1,181,345	+		Atu4063	0.88	-1.6
1,181,351	-		Atu4063	0.89	-1.2
1,181,353	-		Atu4063	0.89	-0.3
1,181,361	-				-0.7
1,181,380	-				-1.8
1,181,623	-		Atu4064	0.17	+3.1
1,182,064	+				-0.5
1,182,064	+				-0.4
1,182,064	+				-0.4
1,182,076	+				+0.2
1,182,076	+				+1.9
1,182,086	+				-0.7
1,182,199	+				+0.4
1,182,223	+				-0.2
1,182,269	+		Atu4066	0.11	-1.1
1,182,269	+		Atu4066	0.11	-1.3
1,182,269	+		Atu4066	0.11	+0.2
1,182,337	+		Atu4066	0.17	-0.4
1,182,359	+		Atu4066	0.18	+0.7
1,182,431	+		Atu4066	0.24	+1.3
1,182,583	+		Atu4066	0.36	-0.2
1,182,591	-		Atu4066	0.37	+3.2
1,182,634	+		Atu4066	0.40	-0.7
1,182,689	+		Atu4066	0.45	-1.8
1,182,697	-		Atu4066	0.45	+0.1
1,182,710	+		Atu4066	0.46	+0.5
1,182,710	+		Atu4066	0.46	-0.2
1,182,718	-		Atu4066	0.47	-0.9
1,182,734	+		Atu4066	0.48	-0.4
1,182,742	-		Atu4066	0.49	-0.6
1,182,878	-		Atu4066	0.60	-1.1
1,182,923	-		Atu4066	0.63	-1.0
1,182,924	-		Atu4066	0.63	-0.8
1,182,948	+		Atu4066	0.65	-0.5
1,182,961	-		Atu4066	0.66	-0.5
1,182,968	+		Atu4066	0.67	-3.0
1,182,978	+		Atu4066	0.68	-0.3
1,183,030	+		Atu4066	0.72	+0.5
1,183,063	-		Atu4066	0.75	-1.5
1,183,124	-		Atu4066	0.79	+0.0
1,183,148	+		Atu4066	0.81	+1.2
1,183,153	+		Atu4066	0.82	-1.1
1,183,153	+		Atu4066	0.82	-0.7
1,183,242	-		Atu4066	0.89	-0.3
1,183,289	+				-0.0
1,183,327	+				-2.2
1,183,327	+				-1.9
1,183,335	-				-1.1
1,183,386	+				-0.7
1,183,418	-				+0.3
1,183,450	+		Atu4067	0.14	+0.7
1,183,521	-		Atu4067	0.32	-1.1
1,183,605	+		Atu4067	0.53	-0.0
1,183,613	-		Atu4067	0.55	-0.5
1,183,613	-		Atu4067	0.55	-0.3
1,183,614	-		Atu4067	0.55	-1.0
1,183,665	+		Atu4067	0.68	-0.2
1,183,675	+		Atu4067	0.70	+0.1
1,183,702	+		Atu4067	0.77	-0.4
1,183,838	-		Atu4068	0.11	+0.2
1,183,866	+		Atu4068	0.20	-0.5
1,184,046	+		Atu4068	0.77	+2.0
1,184,158	+				+0.0
1,184,158	+				+0.1
1,184,244	-				-0.1
1,184,244	-				-0.4
1,184,366	-				+0.1
1,184,378	+				+1.3