Strain Fitness in Agrobacterium fabrum C58 around Atu4036

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
1,150,251	+		Atu4034	0.87	-0.2
1,150,323	+				+0.7
1,150,375	-				+0.6
1,150,437	+				-1.0
1,150,442	+				-0.0
1,150,466	-				-0.6
1,150,500	+		Atu4035	0.12	-0.2
1,150,559	+		Atu4035	0.20	-0.4
1,150,599	-		Atu4035	0.25	+1.2
1,150,718	+		Atu4035	0.42	-0.8
1,150,718	+		Atu4035	0.42	-2.3
1,150,806	+		Atu4035	0.54	-0.6
1,150,806	+		Atu4035	0.54	-0.6
1,150,814	-		Atu4035	0.55	-1.1
1,150,893	+		Atu4035	0.66	+0.0
1,150,932	+		Atu4035	0.72	+0.6
1,150,957	-		Atu4035	0.75	+0.0
1,151,207	-				-0.0
1,151,359	+		Atu4036	0.11	-0.1
1,151,373	+		Atu4036	0.13	-0.1
1,151,381	-		Atu4036	0.13	-1.6
1,151,473	-		Atu4036	0.22	-1.4
1,151,533	-		Atu4036	0.28	+0.3
1,151,566	+		Atu4036	0.32	+0.5
1,151,746	-		Atu4036	0.49	-2.4
1,151,758	-		Atu4036	0.50	-0.8
1,151,869	+		Atu4036	0.61	-1.2
1,151,872	-		Atu4036	0.62	-1.2
1,151,876	+		Atu4036	0.62	-2.9
1,151,969	+		Atu4036	0.71	-2.1
1,151,969	+		Atu4036	0.71	+0.5
1,151,977	-		Atu4036	0.72	+1.3
1,151,984	-		Atu4036	0.73	-0.5
1,152,029	-		Atu4036	0.77	-1.5
1,152,072	+		Atu4036	0.81	-1.0
1,152,125	-		Atu4036	0.87	+0.7
1,152,153	+		Atu4036	0.89	-0.4
1,152,382	+				-1.9
1,152,552	-		Atu4037	0.17	-0.0
1,152,713	+		Atu4037	0.30	-0.9
1,152,721	-		Atu4037	0.30	-1.0
1,152,744	+		Atu4037	0.32	-0.3
1,152,776	+		Atu4037	0.35	-0.1
1,152,776	+		Atu4037	0.35	-2.6
1,152,776	+		Atu4037	0.35	-1.6
1,152,784	-		Atu4037	0.35	-1.3
1,152,784	-		Atu4037	0.35	-1.0
1,152,790	-		Atu4037	0.36	-1.9
1,152,790	-		Atu4037	0.36	-2.1
1,152,823	-		Atu4037	0.39	-1.8
1,152,833	-		Atu4037	0.39	-1.3
1,153,131	-		Atu4037	0.64	-0.6
1,153,131	-		Atu4037	0.64	-1.1
1,153,213	+		Atu4037	0.70	+2.6
1,153,213	+		Atu4037	0.70	-0.4
1,153,213	+		Atu4037	0.70	-0.1
1,153,221	-		Atu4037	0.71	-0.8
1,153,233	-		Atu4037	0.72	+0.3