Strain Fitness in Agrobacterium fabrum C58 around Atu3966

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
1,069,428	+				-1.0
1,069,457	+				+0.3
1,069,458	+				-0.0
1,069,465	-				+0.2
1,069,465	-				+0.7
1,069,465	-				+0.7
1,069,465	-				+0.5
1,069,506	+		Atu3965	0.11	-5.5
1,069,531	-		Atu3965	0.13	-0.3
1,069,553	-		Atu3965	0.15	+0.8
1,069,617	-		Atu3965	0.22	+0.0
1,069,643	+		Atu3965	0.24	-0.7
1,069,683	-		Atu3965	0.28	+0.1
1,069,704	+		Atu3965	0.30	-0.1
1,069,712	-		Atu3965	0.31	-1.5
1,069,712	-		Atu3965	0.31	-2.5
1,069,753	+		Atu3965	0.35	+1.2
1,069,753	+		Atu3965	0.35	+0.2
1,069,761	-		Atu3965	0.36	-1.3
1,069,880	+		Atu3965	0.47	+0.9
1,069,971	-		Atu3965	0.56	+0.6
1,069,990	+		Atu3965	0.58	+0.4
1,070,022	+		Atu3965	0.61	-0.3
1,070,092	-		Atu3965	0.68	-0.6
1,070,098	-		Atu3965	0.69	+4.5
1,070,107	-		Atu3965	0.70	+0.9
1,070,134	-		Atu3965	0.72	-0.0
1,070,193	+		Atu3965	0.78	-0.1
1,070,229	-		Atu3965	0.82	-0.1
1,070,284	+		Atu3965	0.87	+0.8
1,070,289	+		Atu3965	0.88	+0.5
1,070,360	-				-1.1
1,070,386	+				-0.8
1,070,392	+				-2.9
1,070,392	+				-0.5
1,070,392	+				-2.0
1,070,392	+				+3.7
1,070,394	-				+0.3
1,070,394	-				-2.0
1,070,394	-				-2.2
1,070,394	-				-1.0
1,070,394	-				-0.4
1,070,400	-				+0.1
1,070,459	-				-0.5
1,070,589	-		Atu3966	0.17	+0.3
1,070,648	+		Atu3966	0.22	+0.1
1,070,674	+		Atu3966	0.25	-0.8
1,070,735	+		Atu3966	0.30	+0.7
1,070,756	+		Atu3966	0.32	+0.4
1,070,756	+		Atu3966	0.32	-0.8
1,070,764	-		Atu3966	0.33	+0.9
1,070,788	-		Atu3966	0.35	+0.4
1,070,819	+		Atu3966	0.38	-0.5
1,070,871	-		Atu3966	0.43	-3.0
1,070,910	+		Atu3966	0.47	-1.2
1,070,910	+		Atu3966	0.47	-0.1
1,070,916	-		Atu3966	0.47	-0.6
1,070,918	-		Atu3966	0.47	+0.8
1,070,925	-		Atu3966	0.48	-1.0
1,070,925	-		Atu3966	0.48	-0.3
1,071,095	+		Atu3966	0.64	+1.5
1,071,112	+		Atu3966	0.65	-0.6
1,071,120	-		Atu3966	0.66	-2.4
1,071,120	-		Atu3966	0.66	-1.1
1,071,212	+		Atu3966	0.75	+0.1
1,071,220	-		Atu3966	0.75	+2.2
1,071,247	+		Atu3966	0.78	-0.6
1,071,265	-		Atu3966	0.80	+0.3
1,071,313	+		Atu3966	0.84	-1.1
1,071,327	-		Atu3966	0.85	-0.1
1,071,384	+				+0.9
1,071,453	-				-1.5
1,071,460	-				-0.9
1,071,476	+				+1.6
1,071,481	+				-0.0
1,071,705	-		Atu3967	0.16	+2.4
1,071,798	-		Atu3967	0.23	+1.2
1,071,900	+		Atu3967	0.31	+0.2
1,071,921	-		Atu3967	0.33	-0.3
1,071,936	+		Atu3967	0.34	-0.0
1,071,944	-		Atu3967	0.34	+1.8
1,071,979	+		Atu3967	0.37	-0.8
1,072,016	+		Atu3967	0.40	-0.8
1,072,021	+		Atu3967	0.40	+1.8
1,072,138	+		Atu3967	0.50	-0.2
1,072,142	+		Atu3967	0.50	+1.5
1,072,218	-		Atu3967	0.56	-0.1
1,072,220	+		Atu3967	0.56	+0.9
1,072,349	-		Atu3967	0.66	+0.1
1,072,363	-		Atu3967	0.67	+0.1
1,072,371	+		Atu3967	0.68	+0.5
1,072,421	-		Atu3967	0.72	+1.4